Gene Noca_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2015 
Symbol 
ID4598637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2157505 
End bp2158710 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content74% 
IMG OID639776619 
Productphosphoglycerate mutase 
Protein accessionYP_923212 
Protein GI119716247 
COG category[G] Carbohydrate transport and metabolism
[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI
[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.128037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCAGAA GCGTCGTCGT CGAGGCGGAC GGCGGATCGC GCGGCAACCC CGGCCCGGCG 
GCGTACGGCG CCGTCCTCCG TGACGCCGAG ACCGGCGCGG TGATCGCCGA GGACGCCACC
GCGATCGGGA TCGCCTCGAA CAACGTCGCG GAGTACTCCG GGCTGATCGC CGGGCTGCGG
CTCGCCGAGC GGTTCGCGCC GGACGCCGAC ATCGAGGTCC GGATGGACTC CAAGCTCGTG
GTCGAGCAGA TGTCCGGGCG CTGGAAGATC AAGCACCCCG ACATGCGGCC GCTGGCGACC
GAGGCGAGCC GGCTGGCCCC GTTCGGGACG ACGTACACCT GGGTGCCGCG CGAGCAGAAC
AAGCACGCCG ACCGGCTCGC CAACGAGGCG CTCGACGGCT TGCGCAGCGG TGTCTCGGTG
CCCGCCGAGG CGGCCGAACC CGACTCGCTG ATCGAGGAGG TCGAGTCACC GGAGGAGCGG
GCGGAGGCCG GTCAGGAGCA GCCCGCGTCG ATCCAGAGCC AGGCCCGAGG GTGGGGCGGC
GGGGGGACGC CGACGACGGT GGTGCTGGTC CGCCACGGGG TCACCCCGCA CACGACCGAG
AAGCGCTTCT CGGGCGGCCT CGCCAGCGCC AACCCGGGCC TGAGCGAGGA AGGCCGGGCG
CAGGTGCGCG CCGTCGCCGA CTGGCTCGCC CCGCTCGCCG AGCGGGTGGA CGTCGTGCTC
TCCTCCCCGG TGCGGCGCAC CCGGGAGTCC GCGGAGCTCG TCGCCGAGCG GCTCGGTCAG
GAGGTCCGGG TCGAGCCCGG GTTCGCCGAG ATGGAGTTCG GCGCCTGGGA CGGGCTGACC
TTCGCCGAGG TGGGGGAGCG GCACCCCGAG GATCTCACGG CGTGGCTGGG CTCCCTCGAC
GTCGCGCCCG GTGGCCCGCA GGGCGGTGGG GAGTCGTTCC GCGTGGTGCA GGAGCGGGTC
CTCGCGGGTC TGAGCCGACT GCTCGACGAG CACGCCGGCC GCACCGTCGT GGTCGTCAGC
CACGTCACGC CGATCAAGAC CCTGGTCGCC CACGCCCTCG ACGCCCCGCT GGAGGCGGTG
TTCCGGATGG AGCTCACCCC CGCGTCGGTG ACCGTCGTGT CCTACTACGA CGACCGCCCG
TCGCTGCGGA TGTACAACGC GCTGCCGCCC GGCAACGACG TCTTCGGCGC CGCCAGCACC
TGGTAG
 
Protein sequence
MTRSVVVEAD GGSRGNPGPA AYGAVLRDAE TGAVIAEDAT AIGIASNNVA EYSGLIAGLR 
LAERFAPDAD IEVRMDSKLV VEQMSGRWKI KHPDMRPLAT EASRLAPFGT TYTWVPREQN
KHADRLANEA LDGLRSGVSV PAEAAEPDSL IEEVESPEER AEAGQEQPAS IQSQARGWGG
GGTPTTVVLV RHGVTPHTTE KRFSGGLASA NPGLSEEGRA QVRAVADWLA PLAERVDVVL
SSPVRRTRES AELVAERLGQ EVRVEPGFAE MEFGAWDGLT FAEVGERHPE DLTAWLGSLD
VAPGGPQGGG ESFRVVQERV LAGLSRLLDE HAGRTVVVVS HVTPIKTLVA HALDAPLEAV
FRMELTPASV TVVSYYDDRP SLRMYNALPP GNDVFGAAST W