Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2006 |
Symbol | |
ID | 4598628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 2148057 |
End bp | 2148728 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639776610 |
Product | response regulator receiver |
Protein accession | YP_923203 |
Protein GI | 119716238 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.379718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCAGGA TCCTGATCGT CGAGGACGAG GAGCGGATCG CGTCGTTCCT GGCCAAGGGG CTGCGCGCCG ACGGCCACGT GACGACCTGC GTGGCGGACG GCCGTGAGGG GCTCGACCTG GCGCTCGGCG GCGACGTCGA CCTGGTCGTG CTCGACATCG GGCTGCCCGG GATGGACGGC TTCGAGGTGC TCGACCAGCT GCGCTCCCAG GGCTCCACGG TCCCGGTCAT CGTGCTGACC GCCCGCGACT CGGTCGGCGA CACCGTCTCC GCGCTCGAGG GCGGCGCCGA CGACTACATG CCCAAGCCGT TCCGCTTCGC CGAGCTGCTC GCGAGGGTCC GGCTGCGGCT GCGGCAGAGC GCCGACGCGG GCGGGGCGTC GCGAGAGGAC GTGCTGCAGT CCGGCCGGGT CAAGCTGGAC GTACGGACCC GGCGCGCCGT GGTCGAGGAC CGGCAGGTCG ACCTGTCGGC CCGGGAGTTC TCGCTCGCGG AGATCTTCAT GGTCAACGCC GGCCAGGTGC TCTCCCGCGA GCAGCTGCTC GACCACGTCT GGGGGATGGA CTTCGACCCC GGCTCGAACG TGGTCGACGT GTACGTCGGC TATCTGCGCA AGAAGCTCGG CGCCGACACC ATCGCCACCG TCCGGGGCAT GGGGTACCGC TTCAACCGCT GA
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Protein sequence | MARILIVEDE ERIASFLAKG LRADGHVTTC VADGREGLDL ALGGDVDLVV LDIGLPGMDG FEVLDQLRSQ GSTVPVIVLT ARDSVGDTVS ALEGGADDYM PKPFRFAELL ARVRLRLRQS ADAGGASRED VLQSGRVKLD VRTRRAVVED RQVDLSAREF SLAEIFMVNA GQVLSREQLL DHVWGMDFDP GSNVVDVYVG YLRKKLGADT IATVRGMGYR FNR
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