Gene Noca_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1936 
Symbol 
ID4599841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2065973 
End bp2066836 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content77% 
IMG OID639776534 
ProductABC transporter related 
Protein accessionYP_923133 
Protein GI119716168 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.681734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGCGC CCGCACCAGG ATCGGCCACC GGGCCCGTCG TCGAGCTCAG CGGCGGCGCC 
GTCGCCATCG CGGGCCGCCC GATCCTGCGC GGCATCGACC TCACGGTCCC CGCCGGGGAG
TTCCTGGCGC TGATGGGCGC CAACGGGTCG GGCAAGTCGA CGCTGGTGCG CGCGCTCACC
GGGCTGCACC CGCTGGCCGC CGGGAGCCTG CGGCTGTTCG GGACGGCGTA CGACGACTTC
CACGACTGGC GCCGGGTCGG CTACGTCCCC CAGCGCGGCA GCGCGGCCTC CGGCGTGCCG
GCCTCGGTGT GGGAGGTGGT CGCGTCGGGG CGGCTGACCC ACCGCCCGCT GTTCCGCCGA
CTCGGGCGGC GCGACCGCGC GGCGATCGTC GACGCCCTGG AGGTGGTCGG CCTGGCCGAC
CGCGCGGGCG ACGGCGTCTC GACGCTGTCC GGCGGCCAGC AGCAGCGGGT GCTGATCGCC
CGCGCGCTGG CCGGGGAGCC CGAGCTGTTC TTCCTCGACG AGCCGACCGC GGGCGTCGAC
CTGCCCAACC AGCAGGTGCT CGCCGACAGC CTGGCGACGC TGTCGGGGCG GGGCGCGACC
GTGGTGCTGG TGGCCCACGA GCTCGGCCCG ATGGCTCCGC TGGTCGACCG TGCGGTGGTG
ATGCGCGACG GCCGGATCAC CTACGACGGC CCGCCGCTGA CCCACGACCA GGTGCACGAG
CCCGAGCTCT CCGCGGACCT GGCGCTCGCC CACGTCGACG ACCTCGACCC CGGGCACCAC
CACGACCACG CGACGGGGGC GCGCCACGAC CACGCCCCGC ACGTGGCATC GCCCCTCGAC
CGGCACGCCG AGGAGGACCG GTGA
 
Protein sequence
MSAPAPGSAT GPVVELSGGA VAIAGRPILR GIDLTVPAGE FLALMGANGS GKSTLVRALT 
GLHPLAAGSL RLFGTAYDDF HDWRRVGYVP QRGSAASGVP ASVWEVVASG RLTHRPLFRR
LGRRDRAAIV DALEVVGLAD RAGDGVSTLS GGQQQRVLIA RALAGEPELF FLDEPTAGVD
LPNQQVLADS LATLSGRGAT VVLVAHELGP MAPLVDRAVV MRDGRITYDG PPLTHDQVHE
PELSADLALA HVDDLDPGHH HDHATGARHD HAPHVASPLD RHAEEDR