Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1936 |
Symbol | |
ID | 4599841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 2065973 |
End bp | 2066836 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 639776534 |
Product | ABC transporter related |
Protein accession | YP_923133 |
Protein GI | 119716168 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.681734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCGCGC CCGCACCAGG ATCGGCCACC GGGCCCGTCG TCGAGCTCAG CGGCGGCGCC GTCGCCATCG CGGGCCGCCC GATCCTGCGC GGCATCGACC TCACGGTCCC CGCCGGGGAG TTCCTGGCGC TGATGGGCGC CAACGGGTCG GGCAAGTCGA CGCTGGTGCG CGCGCTCACC GGGCTGCACC CGCTGGCCGC CGGGAGCCTG CGGCTGTTCG GGACGGCGTA CGACGACTTC CACGACTGGC GCCGGGTCGG CTACGTCCCC CAGCGCGGCA GCGCGGCCTC CGGCGTGCCG GCCTCGGTGT GGGAGGTGGT CGCGTCGGGG CGGCTGACCC ACCGCCCGCT GTTCCGCCGA CTCGGGCGGC GCGACCGCGC GGCGATCGTC GACGCCCTGG AGGTGGTCGG CCTGGCCGAC CGCGCGGGCG ACGGCGTCTC GACGCTGTCC GGCGGCCAGC AGCAGCGGGT GCTGATCGCC CGCGCGCTGG CCGGGGAGCC CGAGCTGTTC TTCCTCGACG AGCCGACCGC GGGCGTCGAC CTGCCCAACC AGCAGGTGCT CGCCGACAGC CTGGCGACGC TGTCGGGGCG GGGCGCGACC GTGGTGCTGG TGGCCCACGA GCTCGGCCCG ATGGCTCCGC TGGTCGACCG TGCGGTGGTG ATGCGCGACG GCCGGATCAC CTACGACGGC CCGCCGCTGA CCCACGACCA GGTGCACGAG CCCGAGCTCT CCGCGGACCT GGCGCTCGCC CACGTCGACG ACCTCGACCC CGGGCACCAC CACGACCACG CGACGGGGGC GCGCCACGAC CACGCCCCGC ACGTGGCATC GCCCCTCGAC CGGCACGCCG AGGAGGACCG GTGA
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Protein sequence | MSAPAPGSAT GPVVELSGGA VAIAGRPILR GIDLTVPAGE FLALMGANGS GKSTLVRALT GLHPLAAGSL RLFGTAYDDF HDWRRVGYVP QRGSAASGVP ASVWEVVASG RLTHRPLFRR LGRRDRAAIV DALEVVGLAD RAGDGVSTLS GGQQQRVLIA RALAGEPELF FLDEPTAGVD LPNQQVLADS LATLSGRGAT VVLVAHELGP MAPLVDRAVV MRDGRITYDG PPLTHDQVHE PELSADLALA HVDDLDPGHH HDHATGARHD HAPHVASPLD RHAEEDR
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