| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1927 |
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| Symbol | |
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| ID | 4596374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2054465 |
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| End bp | 2056207 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639776525 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_923124 |
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| Protein GI | 119716159 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCCGGC CCCGCACCGA CCCGAGCGAG GACATCATGA CCATTCCCCA GCAGCAGCCC
AGCGGTATGC CGTTCCGGCG CTACCGCCCG TTCCCCCCGA TCGACCTGCC CGACCGCAGC
TGGCCGCAGC GCACGATCAC CCAGGCACCC CGGTGGCTCT CCACCGACCT GCGCGACGGC
AACCAGGCAC TGATCGACCC GATGTCACCC GCCCGCAAGC TGAAGATGTT CGACCTGCTC
GTGCGGATGG GCTACAAGGA GATCGAGGTC GGCTTCCCGT CGGCCAGCGA GACCGACTTC
AGCTTCGTGC GCCAGCTCAT CGAGAGCGAC CACATCCCCG ACGACGTCAC GATCTCGGTG
CTGACCCAGG CCCGCGAGGA CCTGATCGAG CGCAGCGTGC AGTCGCTGAT CGGCGTACCC
CGCGCGAACA TCCACCTCTA CAACGCGCTC GCGCCGCTGT TCCGCCGTGT GGTGTTCCGG
GCCAGCAAGG ACGAGGTCAA GGACATCGCC GTGCGCGGCA CCCAGCTGGT GATGAAGCAC
GTCGAGAACA ACCTCGACAC GACCGTCATC GGCTACGAGT ACAGCCCGGA GATCTTCACC
AGCACCGAGC TGCCGTTCTC GGTGGAGGTC TGCGAGGCGG TCTCGGACGT CTGGCAGCCC
GACGACGGCC GCGAGATCAT CCTGAACCTG CCGGCGACCG TCGAGGTCGC GACCCCGAAC
GTGTACGCCG ACCAGATCGA GTGGTTCTCC CGCCAGCTGA CCCGGCGCGC GAACACGGTG
ATCTCGCTGC ACCCGCACAA CGACCGCGGC ACCGCGGTCG CGGCGACCGA GCTGGCCGTG
ATGGCCGGCG CGGACCGGGT CGAGGGCTGC CTGTTCGGGC ACGGCGAGCG CACCGGCAAC
GTCGACCTGG TCACGCTGGG GCTGAACCTG TTCAGCCAGG GCGTCGACCC GCAGGTCGAC
TTCTCCGACA TCGACGAGAT CCGGCGCACG GTCGAGTACT GCACCCAGCT GCCCGTCCAC
CCGCGACACC CGTACGCCGG CGACCTGGTC TACACGGCGT TCTCCGGCTC CCACCAGGAC
GCGATCAAGA AGGGCCTGGA GGACCTGGAC CGGCAGGCCG CCGAGCAGGG CGTGCCGGTG
GGGGAGCTGC CCTGGGAGGC GCCGTACCTG CCGATCGACC CGAAGGACGT CGGCCGCACC
TACGAGGCCG TGATCCGGGT GAACAGCCAG TCCGGCAAGG GCGGCGTGGC CTACATCCTG
AAGGCCGAGC ACAAGCTCGA CCTGCCCCGC CGCGCGCAGA TCGAGTTCAG CCGGGTGGTC
CAGGAGCGCA CCGACGCCGA GGGCGGCGAG ATGTCGCCCG ACGAGATCTG GTCGGTGTTC
TCAGCCGAGT ACCTCGACCG TCGGACGCCC CTCGAGCTCA ACTCCGTGCA CACCTCGTCG
GCGGCGGGGG AGAAGGACGC GCTCGACGTG AACGTCTACG TCCACGGCGA GCTGATGTCG
CTGCACGGGG TCGGCAACGG CCCGATCGCG GCCTTCGTCA GCGCGATCAA CGAGCTCCCG
AACGACTGGG ACGTCCGGGT CCTCGACTAC GCCGAGCACG CACTCTCCGC CGGCGGCGAC
GCGCTCGCGG CGGCGTACGT CGAGTGCCTG GTCCGCGACC AGGTCTACTG GGGCGTCGGC
GTCGACGCCA ACATCGTCAC CGCGTCGCTG AAGGCCGTGA TCAGCGCCGT CAACAGGGCT
TGA
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| Protein sequence | MRRPRTDPSE DIMTIPQQQP SGMPFRRYRP FPPIDLPDRS WPQRTITQAP RWLSTDLRDG
NQALIDPMSP ARKLKMFDLL VRMGYKEIEV GFPSASETDF SFVRQLIESD HIPDDVTISV
LTQAREDLIE RSVQSLIGVP RANIHLYNAL APLFRRVVFR ASKDEVKDIA VRGTQLVMKH
VENNLDTTVI GYEYSPEIFT STELPFSVEV CEAVSDVWQP DDGREIILNL PATVEVATPN
VYADQIEWFS RQLTRRANTV ISLHPHNDRG TAVAATELAV MAGADRVEGC LFGHGERTGN
VDLVTLGLNL FSQGVDPQVD FSDIDEIRRT VEYCTQLPVH PRHPYAGDLV YTAFSGSHQD
AIKKGLEDLD RQAAEQGVPV GELPWEAPYL PIDPKDVGRT YEAVIRVNSQ SGKGGVAYIL
KAEHKLDLPR RAQIEFSRVV QERTDAEGGE MSPDEIWSVF SAEYLDRRTP LELNSVHTSS
AAGEKDALDV NVYVHGELMS LHGVGNGPIA AFVSAINELP NDWDVRVLDY AEHALSAGGD
ALAAAYVECL VRDQVYWGVG VDANIVTASL KAVISAVNRA
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