Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1834 |
Symbol | |
ID | 4597672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 1955309 |
End bp | 1956082 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639776433 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_923032 |
Protein GI | 119716067 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCCGC TCTTCGACCT CACCGGCAAG ACCGCGCTCG TCACCGGCGG CGGCCGCGGC ATCGGCCGGA TGGCCGCGCG CGGCCTCCTC CAGGCAGGCG CGACCGTGAT CATCGCCAGC CGCAAGCTCG CCGACTGCGA GCAGACCGCG GCCGAACTGG CCGACCTCGG CCGGGTCGTC CCCCTGGCGG CGGACCTGTC CACCCAGGAG GGCTGCCGCG AACTGGCCGC CGCGGTCGCC GAGCACACCG ACGCTCTGCA CGTGCTGGTC AACAACGCCG GCGCGGTCTG GGGCGCTCCG TTCGCGGAGT TCCCGGCCAG CGGCTGGGAC AAGGTCCTCG ACCTGAACCT GAAGGGCCCC TTCTACCTGA CCCAGGAGCT GATCGGCCTG CTGCGCGCGG CAGCCACGGA CGGCGACCCG GCGCGCGTCG TGAACATCGG CTCGATCGAC GGGCTCCGGG TCCCGGCGCT GCCGAACTTC TCCTACTCCG CGGCCAAGGC GGGCCTGCAC CACCTCACCC GGGTGCTGGC CGTCGAGCTC GGCCCGGACC TCACCGTGAA CGCGATCGCG CCGGGTCCCT TCGCCTCCAA GATGATGGCG GCCACGCTCG AGAAGGAGAA GGAGACGTTT GAGGAGGTGG CACCCATGGG GCGCATCGGC GCCGACGACG ACATCGCCGG CGCAATCGTC TACCTGGCTG CGCGGGCCTC GGCGTACGTG ACCGGCGTGG TGCTACCCGT TGACGGCGGC ATCTCGGTCG CGTCCGTCAT CTGA
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Protein sequence | MNPLFDLTGK TALVTGGGRG IGRMAARGLL QAGATVIIAS RKLADCEQTA AELADLGRVV PLAADLSTQE GCRELAAAVA EHTDALHVLV NNAGAVWGAP FAEFPASGWD KVLDLNLKGP FYLTQELIGL LRAAATDGDP ARVVNIGSID GLRVPALPNF SYSAAKAGLH HLTRVLAVEL GPDLTVNAIA PGPFASKMMA ATLEKEKETF EEVAPMGRIG ADDDIAGAIV YLAARASAYV TGVVLPVDGG ISVASVI
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