Gene Noca_1833 details

Gene Information

• Locus tag: Noca_1833
• ID: 4597671
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 1954640
• End bp: 1955350
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 639776432
• Product: regulatory protein, TetR
• Protein accession: YP_923031
• Protein GI: 119716066
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAGGA AGCCCGACGC GCTCGGCGAA GCCGGTGCAC GCCGGATGGC GTTCCAGCGC 
GAGCACGAGT ACGTGTCCCC CCGGGGACTG TTCGACGACG TCGAGCCCAA GGGGTCGCGT 
CGGTTCCTGA CCGCCGCCGT CGCGGCGTTC AACGGCCGCG GCTACCACGC GACGACCACG 
CGCGACATCG CCACCCTGGC GGGTTCGAGC CCGGCCGGGA TCTACACGTA CTACGCGACC 
AAGGCCGATC TGCTCTACGA GATCGCGGTG ATCGCGCACC AGTACATCCT CGACGAGACG 
CTGGCCGCGG TCGCGTCGGC GTCCGACCCG ATCGGCCGGA TCAGCGAGAT CGTCCGGCGG 
TCGGTGACCT ACCACGCCGA GGAGCACGTC CTCGCCCGCG TGGTGAACAC CGACTTCCGC 
TCGCTCGAGG TGCAGCGGCT GGCCACGATC ATGAAGATGC GGCGGCAGAT CAGCCGGGTG 
GTGCACGACG AGGTGCAGCG CGGCGTCGAC CTGGGCGTGT TCCACGTCGC CCACGTCGAT 
GGCGCCGCGA TCGCGATCCT GCGCCTGATG GACGTGGCGC CCTGGTACAA CGAGCGCGGA 
CCGATGTCCC CGAGCGAGCT CGCCGAGGTC TACCTCGGGC TCATCTTGAA CATGCTCCGC 
GCCGATCGCT CAGATGACGG ACGCGACCGA GATGCCGCCG TCAACGGGTA G 

 

Protein sequence

MARKPDALGE AGARRMAFQR EHEYVSPRGL FDDVEPKGSR RFLTAAVAAF NGRGYHATTT 
RDIATLAGSS PAGIYTYYAT KADLLYEIAV IAHQYILDET LAAVASASDP IGRISEIVRR 
SVTYHAEEHV LARVVNTDFR SLEVQRLATI MKMRRQISRV VHDEVQRGVD LGVFHVAHVD 
GAAIAILRLM DVAPWYNERG PMSPSELAEV YLGLILNMLR ADRSDDGRDR DAAVNG