Gene Noca_1791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1791 
Symbol 
ID4597703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1903376 
End bp1903918 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content71% 
IMG OID639776390 
Producthypothetical protein 
Protein accessionYP_922990 
Protein GI119716025 
COG category[R] General function prediction only 
COG ID[COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGTTCA CCCATGACAC CGAGGCGTCC CTCCAGGCGG CGGCGATCCT GGCGAACTCG 
AGGCTGGAGC CGGACACGTT GACCAGGGTC GAGGACCTGG ACGCGTTCTA CGCCGAGTTC
GAGTACACCG GCCGGCACGA CCGCGACCGC GCCGAGCTGG ACGCGGTCCG AGCGATCCGG
CCGGCGCTCT ACGACCTGCT CACCGCCGAT CGCGACCACG CGGTCGAGAT GGTGAACGCG
ATGCTCGCCG AGGCCGCCGC GGTGCCCCAG CTGGTGCGCC ACGACGTCTG GGACTGGCAC
CTGCACGCGG TCGCACCCGA GCAGGACCTG CCGACCCGGA TCCTGGTCGA GACCGCGATG
GCGATGATCG ACGTGATCCG CGCGGACGAG ATGTCGCGCC TCGGGGTGTG CGCCGACGAC
TCCTGCGACG GCGTGGTCCT CGACCTCTCC CGCAACCGCT CGAAGCGCTT CTGCTCCACC
GCCTGCGGCA ACCGCAACGC CGTGGCCGCC TACCGCGCCC GCCGGTCGAG TCGGGAGTTC
TGA
 
Protein sequence
MPFTHDTEAS LQAAAILANS RLEPDTLTRV EDLDAFYAEF EYTGRHDRDR AELDAVRAIR 
PALYDLLTAD RDHAVEMVNA MLAEAAAVPQ LVRHDVWDWH LHAVAPEQDL PTRILVETAM
AMIDVIRADE MSRLGVCADD SCDGVVLDLS RNRSKRFCST ACGNRNAVAA YRARRSSREF