| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1665 |
|---|
| Symbol | |
|---|
| ID | 4600044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 1768867 |
|---|
| End bp | 1769817 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639776264 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_922865 |
|---|
| Protein GI | 119715900 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.148623 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGAGG CGTTCGCCGC CATCGAGCGC ACCTGTGCGG ACCCGGCCGT GACGGCGGCC
GGGCTGGTCA AGGACTTCGG CACGACGCGG GCCCTCGACC ACCTGGAGCT GACCGTGCGC
ACGGGGGAGG TGCACGGCTT CCTCGGTCCC AACGGTGCGG GCAAGACCAC GACGATCCGG
GTCCTCCTCG GCCTGCTGCG TGCCTCGGGG GGCCGGGTCA GTCTTCTCGG TGGGGATCCG
TGGCGCGAGG CCGCGGCGCT GCACCGCCGG CTCGCGTACG TGCCCGGAGA GGTGAACCTC
TGGCCGAACC TGACCGGTGG CGAGGTCATC GACCTGCTCG GCGCACTGCG CGGTGGCCTG
GACCCGGCGC GCCGTGGGCA GCTGCTGGAG CAGTTCGAGC TGGACCCGAC CAAGCAGGTC
CGGTCCTACT CGAAGGGCAA CCGCCAGAAG GTCGCGCTGG TGGCGGCGTT CGCCTCCGAC
GTCGAGCTCT ACCTCCTCGA CGAGCCGACC TCGGGCCTGG ACCCGCTGAT GGAGACGGTC
TTCCAGGACG TCGTGCGCGG GGTGCGGGAG CGCGGCCGCA CGGTGCTGCT CTCGAGCCAC
ATCCTCTCCG AGGTGGAGGC GCTCTGCGAC CGGGTCACGA TCATCCGGAA CGGCCGGGCG
GCCGAGTCGG GCACCTTCGC CGAGCTCCGG CACCTGACCC GCACCACGGT CGTCGCCGAG
ACCGCGCGAC CGGCGACCGG GCTGGCCGGG CTGGTCGCCG TGCACGACCC GACGGTCGAG
GGCAACACCG TCCGGTTCAG CGTCGACGCC GGAGACCTCA ACGGCGTGCT CGAGCGGCTC
GTGGCGTACG ACGTCCGGTC GCTCACCAGC ACCCCGCCCA CGCTGGAGGA GCTGTTCCTC
CGCCACTACG GCGACCGCCT CGATCGGCCG ACCGCCGTCG GGAGCCGGTG A
|
|---|
| Protein sequence | MGEAFAAIER TCADPAVTAA GLVKDFGTTR ALDHLELTVR TGEVHGFLGP NGAGKTTTIR
VLLGLLRASG GRVSLLGGDP WREAAALHRR LAYVPGEVNL WPNLTGGEVI DLLGALRGGL
DPARRGQLLE QFELDPTKQV RSYSKGNRQK VALVAAFASD VELYLLDEPT SGLDPLMETV
FQDVVRGVRE RGRTVLLSSH ILSEVEALCD RVTIIRNGRA AESGTFAELR HLTRTTVVAE
TARPATGLAG LVAVHDPTVE GNTVRFSVDA GDLNGVLERL VAYDVRSLTS TPPTLEELFL
RHYGDRLDRP TAVGSR
|
|---|
| |