Gene Noca_1652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1652 
Symbol 
ID4600031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1754606 
End bp1755379 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content74% 
IMG OID639776251 
ProductIclR family transcriptional regulator 
Protein accessionYP_922852 
Protein GI119715887 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.156826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACCTGC CGGGGGACGA GAGCGCGGAC CTGGACACCG TGCTGGGCAA GGCGGTGACG 
ATGCTGCGTG CCTTCACCGT CGACGACCAG GTGCTCTCGT TGGCCGAGCT GGTCCGCCGC
ACCGGCCTGG CCAAGGCGAC CGTGCACCGG GTCGCGGGGG ACCTGGTCGA CAATCGCCTG
CTCGACCGCA CCGCGCTCGG CTATCGCCTC TCCGGGGGGC TCTTCGAGCT CGGGATGCGC
GCGTCGCTGG AGCGCGGACT GCTCGAGCTG GCGATGCCGT TCCTGCAGGA CCTCTACGAG
CGGACCCACG AGACCGTCCA CCTCGGGCTA CGGGAGGGTC ACGACGTCGT CTACGTCGCC
AAGATCGGCG GCCATCGACA GGCGGCCGCC CCCTCCCGGA CCGGCGGCCG GATGCCGGTG
CACTGCACCG CGATCGGCAA GGCCCTGCTC GCCCACGCCG ACGCCGCCGT GCAGCGCGAG
GTGCTGAGCG GGCCGCTCGA GCGGCGTACG CCGCACACGA TCGTCGCCGC CGGGCTGCTC
CAGCGCCAGC TCGCGACCGT CCTGGAGGCC GGCGTCGCCT TCGAGCAGGA GGAGTCGACG
ATCGGCCTGC TCTGCGTGGC CGCGCCGGTG CTCGACGACA CCGACCACGC GCTGGCGGCG
ATCAGCGTGG CCGGGCCGGT CGGACGGTTC CGGCCGCAGG CGCACGTCGA CGCGGTCCGG
GCCGCGGCCA CGGGCCTCGG CAGTGTGGTC GCGCGGAGGC GCTCGCTGCG CTGA
 
Protein sequence
MDLPGDESAD LDTVLGKAVT MLRAFTVDDQ VLSLAELVRR TGLAKATVHR VAGDLVDNRL 
LDRTALGYRL SGGLFELGMR ASLERGLLEL AMPFLQDLYE RTHETVHLGL REGHDVVYVA
KIGGHRQAAA PSRTGGRMPV HCTAIGKALL AHADAAVQRE VLSGPLERRT PHTIVAAGLL
QRQLATVLEA GVAFEQEEST IGLLCVAAPV LDDTDHALAA ISVAGPVGRF RPQAHVDAVR
AAATGLGSVV ARRRSLR