| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1509 |
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| Symbol | |
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| ID | 4595660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1602119 |
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| End bp | 1605340 |
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| Gene Length | 3222 bp |
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| Protein Length | 1073 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639776107 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_922710 |
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| Protein GI | 119715745 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.254062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCC GGATCAGCAC GCCCGAGGAG CTCGCGGCCG TGATGCGCAC GCCGTACGCC
CCCAGCGACC AGCAGTGGGC CGCGATCTCC GCCCCGCTCG CGCCGGCCGT CGTCATCGCC
GGCGCCGGGT CCGGCAAGAC CACGTTGATG GCCGCGCGCG TCGTCTACCT CGTCGTCACC
GGGCAGGTGC GCCCCGACGA GGTGCTCGGC CTGACGTTCA CGACCAAGGC CGCGAGCGAG
CTGCGCCAGC GGATCCGCCA GGCACTGAAG GCCGCCGGCG CCCTGGAGGA ACCGGAAGAG
GCCCCTGGTG ACGGGCAGAG CGACGTCCTC GAGCCGACGG TCGCGACCTA CAACGCGTAC
GCCGCGGGCC TGCTGACCGA CCACGGCCTG CGGATCGGCC ACGAGCCGGA CACGCGCGTC
ATCACCGACG CCGCCCGCTA CCAGCTGGGA GCTCGCGCGG TCGACCGCTA CACCGGCGAC
GTGCGCTACC TCTCCGACCA CCCCGAGACG GTGATCCAGA ACCTCCTCGC CCTCGACAGC
GCGATGAGCG AGCACCTCGT CGGCCCCGAC GCCGTGCGCG AGATCGACAC CGAGGCGTGC
CGGGGCTTCG AGGCCGCGCT CGCCGAGGAG GTCGCCGGCA AGAACCGCGT CACCTACCGC
GAGGCGATCG AGAAGGCCAT CTCGGCGATC GACCGGCGGG GCGAGCTGCT CGGCCTGGTC
GAGGCGTACC GACGGCTCAA GCGCGACCTC GGTCTGATGG ACTTCTCCGA CCAGATCGAG
CTCGGCGCCC GGCTGGCCAG CGAGCAGCCG GACGTGGGGG AGCTCGAGCG GTCCCGGTTC
AAGGTGGTGC TGCTCGACGA GTACCAGGAC ACCTCGGTCG CCCAGGCCGT GATGCTGTCC
CGGCTCTTCT CCGGCGGCCA TCCGGTGACC GCGGTCGGCG ACCCGAACCA GGCGATCTAC
GGCTGGCGTG GCGCCTCGGT CTCGAACATC CTCAACTTCG CCGACACCTT CCCGGCCGCG
GGCTCACGAG CCGTCCCGAC GTACCCCCTC ACGGTCAACC GGCGCTCGGA CGCCCGCATC
CTCGAGGTCG CCAACCGGCT GGCCGCGCCG CTGTACGAGA AGTACGGCCA GGTCGAGCCC
CTGGTCGCCA AGCCCGAGGC CGAGACCGGC ACGGTCACCA CGCAGGTGTT CGAGACGCAC
GCCGACGAGC TGGCCTGGCT GGTCGGCGCG GTGAAGGAGG CCCACGAGGG GCTGCCCGCC
GACGGGGGCT GGGCGCAGAT CGGCGTGCTG ACCCGCGACA ACGCACACGC CGAGGACGTC
TTCGACGCGC TGACCAGCGC CGGCGTCCCC GTCGAGATCG TCGGCCTCTC CGGCCTGCTC
CGGCTGCCCG AGGTCGCCGA GATCGTCGCC ACCCTGACCC TGCTGCACGA CGTCACGGCG
AACGCCGCGC TGCTCACCCT GCTCACCGGG CCGCGCTGGG CGATCGGCCC GCGCGACCTG
CGGCTGCTCG GCCGGCGCGC GCTCGAGATC GCCGGCCGGC ATGGTCGCGG TGCCGACGCC
GCGTCGATCA CCGACCAGCT CCTCGAGATC GCCGACGGCA TCGACCCCGC CGAGCTCCCG
TCGCTGGACG ACGCGCTCGC CGACCCGGGG GAGCACGCCT ACTCGCCCGA GGCGCTGGAG
CGCTTCGGGC TGCTGTCCGC CGAGCTCCGC ATGCTGCGCA CGTACGTCGG GGAACCCCTG
CTCGACATCG TCCGCCGGAT CATCGACACC AGCGGCACCG ACGTCGAGCT CGGCTCGGCG
GTCAGCCCGG CGGCCGCGGC CCGCCGCGAC AACCTCGACC TGTTCGTGAA GGCGGTCGCC
GAGTTCCAGG CCGTCGACGG GGACGTGACG CTGCCCGCGC TGCTCGCCTA CCTGACCGCC
GAGGACGACC AGGGCAACGG CCTCGACGTC GCGACCCCGA CCGAGGCCGA CTCGGTCAAG
CTGCTCACCG TGCACCGGGC CAAGGGCCTG GAGTGGGACT CGGTCTTCCT CGTCGGCGTC
TGCGAGACCC GGTTCCCGTC CAACCGGTCC CGCACGCTGT GGACCTCCTC GCCGGCGATC
CTGCCGGCAC CGCTGCGAGG CGACGCCGGC GACCTGCCGC AGCTGGCCGG TCACGACAAG
GCCGCGCTCG ACGCCTACCG CGCCGCCACC CGCGACCACG ACGCCGAGGA GGAGCTCCGG
CTCGGGTACG TCGCCTTCAC CCGGGCCGCC CGCCGGCTGT CGGTCACGTC GTACCTCTGG
AGCCCGCGGG CCACGCCGTT CGGCCCGTCC GCCTACCAGC AGGTGGTCCG CGACCAGCTC
CACGACTGGG CGGAGCCGCC CACCTGGCTG GCCAGGCCCG AGAAGGGTGA CCCGAACCCC
TACGACGCCG TCGATCCGTC GCGGCCGTGG CCGGCGACCG GCACCGGCCG CGAGGCGGCG
CTGCGGATCG AGGCGGCCCG CCGGGTCCGC GAGGTCGACG CTGCGGCCGT CGACGCGGGC
CTCGACATGA TCGAGACCGC GCGGGTGGCC GAGTGGGACG CCGAGCTCGA GCGGCTGCTC
GCCGAGGCCC GGCGCGACCG CAGCACCGAC CTCGCCGTCC CGCTGCCCCC CAGCCTGTCC
GCCACCGCCC TCGCTCGGCT CCGCGAGGAC CCCGAGACGT TCGCCCGCGA GCTGGCCCGG
CCGATGCCCC GGCCGCCGTC GTCTGCGGCG CGGTTCGGCA CCCGCTTCCA CGCCTGGGTG
GAGGCACGGT TCGGCCAGCA GGACCTGTTC GACTACGGCG ACCTGCCCGG CCGGGCCGAC
GCCGGCATCG ACGACGACTC CGACCTCAAG GAGCTGATCG CGACCTTCGA GGCCGGCCCC
TTCGCGACCC GGACGCCGCA CCAGGTGGAG GCGCCGTTCG CGCTCGTGCT CCGTCATCCG
GGTGGGCCCG GCCAGGTGGT GCGCGGTCGG ATCGACGCGG TGTACGCCGA GTCGACGCCC
GAGGGCGACG GGTTCCTCGT CGTGGACTGG AAGACCAACC GCGCCGCGAC CGCCGACCCG
CTCCAGCTCG CGCTGTACCG ACTCGCCTGG GCCGAGCTCC ACGACCTGCC GCTCGAGCGG
GTCCGCGCGG CGTTCTACTA CGTCCGCACC GGCGAGGTGG TCGAGCCGCC GGACCTGCCG
GACCGGGCTG CGCTGGAAGC GCTGCTGGAC GGCACCTCCT GA
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| Protein sequence | MSRRISTPEE LAAVMRTPYA PSDQQWAAIS APLAPAVVIA GAGSGKTTLM AARVVYLVVT
GQVRPDEVLG LTFTTKAASE LRQRIRQALK AAGALEEPEE APGDGQSDVL EPTVATYNAY
AAGLLTDHGL RIGHEPDTRV ITDAARYQLG ARAVDRYTGD VRYLSDHPET VIQNLLALDS
AMSEHLVGPD AVREIDTEAC RGFEAALAEE VAGKNRVTYR EAIEKAISAI DRRGELLGLV
EAYRRLKRDL GLMDFSDQIE LGARLASEQP DVGELERSRF KVVLLDEYQD TSVAQAVMLS
RLFSGGHPVT AVGDPNQAIY GWRGASVSNI LNFADTFPAA GSRAVPTYPL TVNRRSDARI
LEVANRLAAP LYEKYGQVEP LVAKPEAETG TVTTQVFETH ADELAWLVGA VKEAHEGLPA
DGGWAQIGVL TRDNAHAEDV FDALTSAGVP VEIVGLSGLL RLPEVAEIVA TLTLLHDVTA
NAALLTLLTG PRWAIGPRDL RLLGRRALEI AGRHGRGADA ASITDQLLEI ADGIDPAELP
SLDDALADPG EHAYSPEALE RFGLLSAELR MLRTYVGEPL LDIVRRIIDT SGTDVELGSA
VSPAAAARRD NLDLFVKAVA EFQAVDGDVT LPALLAYLTA EDDQGNGLDV ATPTEADSVK
LLTVHRAKGL EWDSVFLVGV CETRFPSNRS RTLWTSSPAI LPAPLRGDAG DLPQLAGHDK
AALDAYRAAT RDHDAEEELR LGYVAFTRAA RRLSVTSYLW SPRATPFGPS AYQQVVRDQL
HDWAEPPTWL ARPEKGDPNP YDAVDPSRPW PATGTGREAA LRIEAARRVR EVDAAAVDAG
LDMIETARVA EWDAELERLL AEARRDRSTD LAVPLPPSLS ATALARLRED PETFARELAR
PMPRPPSSAA RFGTRFHAWV EARFGQQDLF DYGDLPGRAD AGIDDDSDLK ELIATFEAGP
FATRTPHQVE APFALVLRHP GGPGQVVRGR IDAVYAESTP EGDGFLVVDW KTNRAATADP
LQLALYRLAW AELHDLPLER VRAAFYYVRT GEVVEPPDLP DRAALEALLD GTS
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