| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1307 |
|---|
| Symbol | |
|---|
| ID | 4598545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 1381500 |
|---|
| End bp | 1382819 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639775901 |
|---|
| Product | nicotinate phosphoribosyltransferase |
|---|
| Protein accession | YP_922508 |
|---|
| Protein GI | 119715543 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01513] putative nicotinate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCCTCA CCCCCGCACC GAGCACCGGC CTCGGCACCG AGTCCAGCAC CGCGCTCCTC
ACCGACCACT ACGAGCTGAC GATGCTCCAG GCCGCGTTGG CGGCCGGGAC AGCGGACCGC
CGGGCGGTCT TCGAGCTGTT CCCGCGACGG CTGCCCGAGG GCCGTCGGTA CGGCGTGGTC
GCCGGCGTCG GCCGGGCCCT GGACGCTGTG GAGCGGTTCC GGTTCGACGA GCAGGTGCTC
GCCGTGCTCG CGGACGTGGT GGACGCACCG ACGCTGGAGT GGTTGGCGTC GTACCGCTTC
TCCGGCGACG TGTGGGGCTA CGCCGAGGGC GAGGCCTACT TCCCCTACTC GCCGATCGCG
ATCGTGGAGT CGACGTTCGC CGAGGCGGTG CTGCTGGAGA CGCTGCTGCT CTCGATCTAC
AACCACGACT CGGCCATCGC CTCGGCCGCC TCCCGGATGA CCCTGGTCGC CGGCGACCGC
CCCTGCATCG AGATGGGGTC GCGGCGCACC CACGAGGAGG CCGCGGTCGC CGCCGCGCGG
GCGGCGTACG TCGCCGGCTT CGCCACCAGC TCGAACCTCG CCGCGCGGCA GCGGTACGGC
GTACCGTCGG CCGGCACCAG CGCCCACAGC TTCACGCTCC TCCACGACAG CGAGGCGGAC
GCGTTCCGGG CCCAGGTGGA CTCGCTGGGG ACCGGCACGA CGCTGCTCGT GGACACCTAC
GACGTCGCGG AGGCCGTGCG GCTGGCCGTG GAGGTCGCCG GACCCGAGCT GGGCGCGGTC
CGCCTCGACT CCGGCGATCT CGGCGCGCTG GCGCACGAGG TCCGGGCGGA GCTGGACCGG
CTCGGCGCCA CCCGCACCCG GATCATCGTC ACCAGCGACC TCGACGAGTT CGCGATCGCC
GCGCTGGCCG CGGCACCGGT CGACGGGTAC GGCGTCGGCA CCGAGCTCGT CACCGGCAGT
GGGCACCCGA CGAGCGGCTT CGTCTACAAG CTGGTGGCGC GTGCCGACGA CGCCGGTGAG
CTGGTGCCGG TCGCCAAGCG CAGCGTGGAC AAGGCCTCGA TCGGCGGCCG CAAGTACGCG
CTGCGGCGCC GGGACGCGTC CGGCACGGCC GAGGCCGAGG TGGTCGGGAT CGGCACGCCT
CCGGTGGACG ACGGCGACGA CCGCCCGCTG CTGGTCCCGC TCGTGCGCGC CGGGGAGGTG
GTCGGGCGGG AGCCGCTCGA CGATGCGCGG GCCCGACACC TGGCCGCGCG CGCCGAGCTC
CCCGTCGCGG TGCAGCAGAT GTCACGCGGC GAGCCGGTGA TCCCGACCCT CCACGTCTGA
|
|---|
| Protein sequence | MSLTPAPSTG LGTESSTALL TDHYELTMLQ AALAAGTADR RAVFELFPRR LPEGRRYGVV
AGVGRALDAV ERFRFDEQVL AVLADVVDAP TLEWLASYRF SGDVWGYAEG EAYFPYSPIA
IVESTFAEAV LLETLLLSIY NHDSAIASAA SRMTLVAGDR PCIEMGSRRT HEEAAVAAAR
AAYVAGFATS SNLAARQRYG VPSAGTSAHS FTLLHDSEAD AFRAQVDSLG TGTTLLVDTY
DVAEAVRLAV EVAGPELGAV RLDSGDLGAL AHEVRAELDR LGATRTRIIV TSDLDEFAIA
ALAAAPVDGY GVGTELVTGS GHPTSGFVYK LVARADDAGE LVPVAKRSVD KASIGGRKYA
LRRRDASGTA EAEVVGIGTP PVDDGDDRPL LVPLVRAGEV VGREPLDDAR ARHLAARAEL
PVAVQQMSRG EPVIPTLHV
|
|---|
| |