Gene Noca_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1175 
Symbol 
ID4599350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1248186 
End bp1249301 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content70% 
IMG OID639775769 
Producttransaldolase 
Protein accessionYP_922376 
Protein GI119715411 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATC AGGTGACCGG CCCGGCGGCC CCCTCCCCCG GCCTGGCCGT CTCTCCGCTG 
CTGCGGATGA CGGAGGAGAC ACCGACCCGG CTGTGGAGCG ACTCCGTGAT GCCCAGGGAG
CTCTCAGCCG CGATCGGCTG GGGTGCGGTA GGAGCAACGT GCAACCCCGT TATCGCCCTG
GCCGCGCTGC GCGACGATCT GCCCCATTGG CAGCGGCGGA TCCGCGAGTA CGCCGACGCG
CACCCGACAG CATCGGAGTC ACGGATCGGT TGGGCCATTG TCGAGGAGCT CTCGATCGAG
GCTGCGAGCC TGCTCACCGG CGCGTTCGCC GAGCACGCCG GCCGCAACGG CCGCTTGTCG
GTGCAGACCG ACCCGCGGCA CTATCGCGAC GCCGATGCGC TGGTGGCGCA GTCGGTCCAG
TTCGACGCTC TCGCGCCCAA CATCATCGTC AAGGTCCCCG CCACGGAGGT CGGCATCCGG
GCGATGGAGG AGGCCACCTA CCGGGGGGTG AGCATCAACG CGACCGTGTC CTTCACCGTG
CCGCAGGCGG TTGCCGTCGC AGAGGCCATC GAGCGCGGCC TGGAGCGACG CGAGGCGGAG
GGCCTCGACG TCACCGGCAT GGGGCCGGTC TGCACGATCA TGCTCGGGCG GCTCGACGAC
TGGCTGAAGG CTCTCGCCGC CCGTGACGGC CACATCGTGG ACGCGGAGAG CCTGGAGTGG
GCCGGCGTCG CGGTGTTCAA GCGCGCGTAC CGCATCTTCC GTGAGCGCGG CTTCCGTACC
CGACTTCTCT CCGCGGCGTT CCGCAATCAC ATGCACTGGA GCGAGCTGGT CGGGGGCGAC
GTGGTCATCT CGCCGCCGTT CGACTGGCAG GTACGGCTCA ACGCCAGTGG CATCGAGCCG
CTGCCGCTGA TCGACGAGCC GGTCGCCGAC GCCATCCTGG ACGGCCTGAA CCGGGGATTG
CCGGAGTTCC GGCGAGCCTA CGAGCCGGAC GGGATGTCGA TCAGCGAGTT CGAGGACTTC
GGTGCGACGC GGCGTACGCT CCGGCAGTTC CTCGTCGCAT GCGCAGAGCT CGAGAGCGTG
GTGCGCGACG TGCTGTTGCC CGATCCCACG ACGTAG
 
Protein sequence
MSDQVTGPAA PSPGLAVSPL LRMTEETPTR LWSDSVMPRE LSAAIGWGAV GATCNPVIAL 
AALRDDLPHW QRRIREYADA HPTASESRIG WAIVEELSIE AASLLTGAFA EHAGRNGRLS
VQTDPRHYRD ADALVAQSVQ FDALAPNIIV KVPATEVGIR AMEEATYRGV SINATVSFTV
PQAVAVAEAI ERGLERREAE GLDVTGMGPV CTIMLGRLDD WLKALAARDG HIVDAESLEW
AGVAVFKRAY RIFRERGFRT RLLSAAFRNH MHWSELVGGD VVISPPFDWQ VRLNASGIEP
LPLIDEPVAD AILDGLNRGL PEFRRAYEPD GMSISEFEDF GATRRTLRQF LVACAELESV
VRDVLLPDPT T