Gene Noca_1174 details

Gene Information

• Locus tag: Noca_1174
• ID: 4599349
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 1247423
• End bp: 1248148
• Gene Length: 726 bp
• Protein Length: 241 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639775768
• Product: GntR family transcriptional regulator
• Protein accession: YP_922375
• Protein GI: 119715410
• COG category: [K] Transcription
• COG ID: [COG1802] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAGCT CCGACCCGCT GACCCGCAGC GTGCTGGCAG ATCAGGTCAA GGAGTGGCTG 
CTCGAGGCGA TCCTGGGCGG CGCCTACCCC CCGGACTCGC GGATCGTGGA GACCGCGGTG 
GCCAAGGAGC TCGGCACCAG CCAGGCCCCC GTGCGCGAGG CATTGCGCGG TCTCGAGGCA 
CTGGGGATCG TCGAGATCGC CCCGTTCCGC GGGGCCCGCG TACGCCGGCT CGAGGCAGCC 
GAGCTGCTCG AGGCCTACGT CGTCCGATGC ACGATCGAGG TGCTGGGCGC CCGCCTGGCA 
ATGGCTCGGC TGACTGATGA GGACATCGCC GGGCTGCTGG AGATCGGTGA ACAGATGCAG 
AGCGCCGCCG ACGCGTCCGA CGGCCGGGCT CTCGCCGTGG TGGACGCCAG CCTGCACGGC 
CGCATCATGG AGCTGGCGGG CAACCGCACG CTGCTCCGCG TGTGGCGGTC CTTGGAGCCG 
ATATCTCGTA CCTACATCAC CCTCGCCGGC CCCGGCTCCG ACCCGCAGTG GACCGCAGGC 
CTGCACACCC CGATCCTCGA CGCGATCCGC CTTCGCGACA CCGATGGCGT CGTCCACGCG 
ATCGAGAGCC ACTTCGATGA GATCCGTGAC TGGCTGGCGG ACCACCTGGC GGAGGTCGTC 
GAGCAGCAGG CGGCCGGGAC CTCGGGACGC ACGGACACCA TGAGTGCCGG TCGAGGCCAC 
GACTGA 

 

Protein sequence

MSSSDPLTRS VLADQVKEWL LEAILGGAYP PDSRIVETAV AKELGTSQAP VREALRGLEA 
LGIVEIAPFR GARVRRLEAA ELLEAYVVRC TIEVLGARLA MARLTDEDIA GLLEIGEQMQ 
SAADASDGRA LAVVDASLHG RIMELAGNRT LLRVWRSLEP ISRTYITLAG PGSDPQWTAG 
LHTPILDAIR LRDTDGVVHA IESHFDEIRD WLADHLAEVV EQQAAGTSGR TDTMSAGRGH 
D