| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1165 |
|---|
| Symbol | |
|---|
| ID | 4599340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 1237502 |
|---|
| End bp | 1238530 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639775760 |
|---|
| Product | cyclase family protein |
|---|
| Protein accession | YP_922367 |
|---|
| Protein GI | 119715402 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1878] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCAAG CCACTAGATC TCGCCGTCAT GCCGAGGCGC ACAGGTTCCC ACCGGGACGC
ATCTCACCTA CTATCGATAA TCGACTGAGT CCCGCATGGA GGAGCCGACC GTTGTCCAGC
ACACCGTTCC CGGAGGCCCC GGAGGGCCTG CGCCACGTCG GCCCCGCAGG CCACCAGAGC
CCCGCCGACG TCTTGGCGGC ACTCCGGCTG CCCGAGCAGG GGCGGGTGTT CTCGCTGGCG
CTGCCGCGGT ACACCGGGAT GCCGCTCTTC GGGTCGCACC CGCCGTTCCA GGTGACGATG
TACCGCACGC CCGCCGGGCT GCGCGGTGAC GGCGTCGAGC CGTGGGGGCC CCACAACGAG
GTCAACCTGC AGTACATGGC CGAGAACGTC AGCGGGACCG CGCACAGCGG TGCGCACGTG
GACGCGCTGG CCCACATGAC GATCGGCGAG GACGACCACT GGTACGGCGG CGGCAACGCC
CAGGAACATC TCGGCGACCG CGGACCCACG GTCGGAGACG GCAGCAGGTT GCCGCCGTTC
ATCCGCCGCG GGGTGCTGTT GGACGTGCCG GGATACCTCG GGGTCGACGC ACTCCCGTCG
CACCAGCCCG TCGACGCCGC TCAGCTCCAG GCGGTGGCCA GGCACCAGGG CGTCACCGTC
CGCCGAGGCG ACGTCGTTTT GGTCCGGACC GGCTACCTGA GCGCGTGGCC GGACACCGAC
CGGATGGCGA GGCACACCAC CGCCGGGCCC GACCTGTCGG CAGCCCGCTG GTTGCTGGAA
CAGGGTGTGG TCGCCACCGG CAGCGACACG GAGACCTACG AGGTCCAGCC GGCACCCGAC
CCCGGCTCGC CGGCCAACCC CCAGCCCGTG CACACCCTGC TGTTGATCGA GCACGGCATC
TACCTCTTCG AGGGGATCTA CCTCGAGGAG CTGGCTGCCG AGCACGTCCA CGAGTTCCTC
TTCGTCGCCC TGCCCCTGAA GATCAAGGGC ACCACCGGTT CGATGCTGGA CCCGGTGGCC
ATCATCTGA
|
|---|
| Protein sequence | MSQATRSRRH AEAHRFPPGR ISPTIDNRLS PAWRSRPLSS TPFPEAPEGL RHVGPAGHQS
PADVLAALRL PEQGRVFSLA LPRYTGMPLF GSHPPFQVTM YRTPAGLRGD GVEPWGPHNE
VNLQYMAENV SGTAHSGAHV DALAHMTIGE DDHWYGGGNA QEHLGDRGPT VGDGSRLPPF
IRRGVLLDVP GYLGVDALPS HQPVDAAQLQ AVARHQGVTV RRGDVVLVRT GYLSAWPDTD
RMARHTTAGP DLSAARWLLE QGVVATGSDT ETYEVQPAPD PGSPANPQPV HTLLLIEHGI
YLFEGIYLEE LAAEHVHEFL FVALPLKIKG TTGSMLDPVA II
|
|---|
| |