| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1126 |
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| Symbol | |
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| ID | 4599379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1192909 |
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| End bp | 1194201 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639775722 |
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| Product | twitching motility protein |
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| Protein accession | YP_922329 |
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| Protein GI | 119715364 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACGACG CACCGACGAA CGGCTTCGGC CTGCCGCTGG CCGCTCGGCG CCCGACCGCG
CCCGCGGACC CGTCGGCCCC TGCCCCCGCG CCGGTGGCCG TCCCGGTCGC CGCTCCCGTG
GCCGTCCCGG CGCCGGTCGT CGCCCCGGTG GCCGCGGCCG CCGTCGTACC TCCCGCCGCT
CCCGCGCCCG CCGGATCGGC CAACCTGAGC CTCGACGACC TGCTCATCCA CGTGCTGCGG
GTGGGGGCCT CCGACCTGCA CCTGACCACC GGCGCGCCGC CGACCGTGCG GCTGCGCGGC
GAGATGGAGG CCATCGAGGG CTACCCCACG CTGGACGGCG AGCAGCTGCG GCGCACGCTG
TACGGCGTGA TGACCGAGCG GCAGCGCAAG GTCTTCGAGG AGGAGCTCGA GCTCGACTTC
GCGTACGCCG TGCCGGGCCA CGCCCGGTTC CGTGTCAACG TCTTCCAGCA GCGCGAGCAC
CTCGGCGCCG TGATGCGGAT GATCCCCTGG GAGATCGTCC CGCTCGAGGA CCTGGGCATG
CCCGAGGCGG TCGCCGGCTT CAGCGACCTC AAGCGCGGCC TGGTGCTGGT CACCGGCCCC
ACCGGGTCCG GCAAGTCGAC GACCCTGGCC GCGATCATCG ACCGGATCAA CCGGACCCGC
CGCGGTCACA TCGTGACCAT CGAGGACCCG ATCGAGTTCC TGCACGAGCA CCGCGGCTGC
CTGGTCAACC AGCGCGAGGT CGGCTCCGAC ACCCACGGGT TCCGCGACGC CCTCAAGCAC
GTGCTGCGTC AGGACCCCGA CGTGATCCTG GTCGGCGAGC TCCGCGACCT GGACACGATC
TCGGTGGCGC TGACCGCCGC CGAGACCGGC CACCTGGTGT TCGCGACGCT GCACACGCAG
TCCGCGCAGG ACACCATCAC CCGCGTCGTC GACGTGTTCC CCGCCGAGCA GCAGCAGCAG
GTCCGCACCC AGCTCGCCGC GACGCTCCAG GGCGTCGTGT GCCAGACCCT CGTCAAGACC
GCCGACGACC AGGGCCGCGC CGCCGCCGTC GAGGTGATGG TCTGCAACTC CGGCATCCGG
GCGATGATCC GCGACGACAA GCTGCAGCAG ATCCAGGGCG CGCTCCAAGC GGGCGCGCGG
GACGGCATGC AGACCCTCAA CGCCCACCTC GCCGCGCTGG TGAAGGCCGG CCGGATCACG
TACGCCGCGG GCCTCGAGCA CAGCTCGAAC CGCGCCGACT ACGACACGCT CGTCGCCTCC
GACGTCAAGC GCGCCCCGGC CGGGTGGCAG TAG
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| Protein sequence | MNDAPTNGFG LPLAARRPTA PADPSAPAPA PVAVPVAAPV AVPAPVVAPV AAAAVVPPAA
PAPAGSANLS LDDLLIHVLR VGASDLHLTT GAPPTVRLRG EMEAIEGYPT LDGEQLRRTL
YGVMTERQRK VFEEELELDF AYAVPGHARF RVNVFQQREH LGAVMRMIPW EIVPLEDLGM
PEAVAGFSDL KRGLVLVTGP TGSGKSTTLA AIIDRINRTR RGHIVTIEDP IEFLHEHRGC
LVNQREVGSD THGFRDALKH VLRQDPDVIL VGELRDLDTI SVALTAAETG HLVFATLHTQ
SAQDTITRVV DVFPAEQQQQ VRTQLAATLQ GVVCQTLVKT ADDQGRAAAV EVMVCNSGIR
AMIRDDKLQQ IQGALQAGAR DGMQTLNAHL AALVKAGRIT YAAGLEHSSN RADYDTLVAS
DVKRAPAGWQ
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