Gene Noca_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1088 
Symbol 
ID4599568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp1148506 
End bp1149189 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content65% 
IMG OID639775685 
Productresolvase domain-containing protein 
Protein accessionYP_922292 
Protein GI119715327 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAAC GCCGCCGGAG TGATGCTGTC ATCGGCTACC TGCGGGTGAG CACAGAGGAG 
CAGGCGGTCT CTGGCCTCGG CTTGGCGGAC CAGAGGTCGG CGATTGAGGC GGCTTCCGCC 
GCCCGGAACT GGCCTGCTGT CACCTACATC TCAGACGAAG GCCACTCGGC CCGCAGTCTT 
GGGCGCCCGG GAATCTCGGC GGTGCTGACA GCCCTCGCGC GGGGGGAAGC ATCCGTGCTC 
GTAGTCGCGA AGCTTGACCG CCTCTCCCGG TCGCTGCTGG ACTTCGCCAT GCTCATGGAA 
CGAGCGCGTC GAGAGGGTTG GGAACTGGTA GTCCTCGATC TGGCGATCGA CACGACAACC 
CCGAGCGGAG CGCTCATGGC AAACGTCATG GCGTCGTTCG CCGAGTACGA GCGCCAACTC 
ATTGGCACCA GAACAAGCGC GGCCCTCCAG CAACTGAAGA TGCAAGGAGT CCGCTTGGGC 
CGGCCCCGCA AGACGTCCAT CGAAACCCTG AGCCGGATAG CACGCCAACG GGACGCGGGC 
GAGACGCTAG CAGCGATCGC TGGCGGGCTT AACCGGGACG GAGTCCCAAC CACGCGCGGG 
GGAGCCAAGT GGTACCCGTC AACGGTTCGC GCCGCCTTGG AGTCGATGAA GCTGGACGAT 
GCTCTAAGTA CGACCACAAG GTGA
 
Protein sequence
MGKRRRSDAV IGYLRVSTEE QAVSGLGLAD QRSAIEAASA ARNWPAVTYI SDEGHSARSL 
GRPGISAVLT ALARGEASVL VVAKLDRLSR SLLDFAMLME RARREGWELV VLDLAIDTTT 
PSGALMANVM ASFAEYERQL IGTRTSAALQ QLKMQGVRLG RPRKTSIETL SRIARQRDAG 
ETLAAIAGGL NRDGVPTTRG GAKWYPSTVR AALESMKLDD ALSTTTR