| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1059 |
|---|
| Symbol | fumC |
|---|
| ID | 4599665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 1117666 |
|---|
| End bp | 1119063 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639775657 |
|---|
| Product | fumarate hydratase |
|---|
| Protein accession | YP_922264 |
|---|
| Protein GI | 119715299 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0114] Fumarase |
|---|
| TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTTG ACGACACCGC GGACTTCCGC GTCGAGCACG ACAGCATGGG CGAGGTCCGC
GTCCCCGCGG ACGCGCTCTG GCGGGCCCAG ACCCAGCGAG CGGTCGAGAA CTTCCCGATC
AGCGGCACGC CGATCGAGCC GGCGCTGATC CACGCCATCG GCCGGGTGAA GGCGGCGGCG
GCCACGGTGA ACGCCGAGCT CGGGGTGCTC GACGGGGAGC AGGCGGAGGC GATCGTCGCG
GCCGCGAACG CGGTCGCGGA GGGGCGACAC GACGGCGGGT TCCCCATCGA CGTCTTCCAG
ACCGGCTCGG GCACCAGCTC GAACATGAAC GCCAACGAGG TGATCGCGAC CCTCGCCCAG
CGAGCCGGCA CCGACGTGCA CCCCAACGAC CACGTCAACG CCAGCCAGTC GAGCAACGAC
ACGTTCCCGA CCGCGATCCA CGTGGCGTCG ACGCTGGCGG TGACCGGCGA CCTGCTGCCC
GGCCTGGCCG TCCTCCAGGC CAGCCTGCAG CGCAAGGCCG ACGAGTTCGC CGGCCTGGTG
AAGTCGGGGC GCACCCACCT GATGGACGCC ACGCCGGTGA TGCTCGGGCA GGAGCTCGGC
GGCTACGCCG CGACGGTGCG GTACGCCGCG GAGCGTCTCC AGTCGGTGCT GCCGCGGGTG
CGCGAGCTGC CCCTGGGCGG TACGGCGGTC GGCACCGGGA TCAACACCCC GCCCGGGTTC
GCCGAGCGGG TGATCGCCGT ACTCGGCGAG ACGACCGGCG AGCCGTTCAC CGAGGCCCGC
GACCACTTCG AGGCGCAGGG GACCCGCGAC TCGCTGGTCG AGCTGAGCGG CGTGCTGCGC
ACGATCGCGG TCGGGCTGAT CAAGATCTGC AACGACCTGC GGTGGATGTC CTCCGGGCCG
ACGACCGGCC TCGCCGAGAT CCACCTGCCC GACCTCCAGC CGGGGTCGAG CATCATGCCC
GGCAAGGTGA ACCCGGTGCT GCCGGAGGCG ACCCTGATGG TGTGCTTCCA GGTGATCGGC
AACGACGCGG CCGTCACCGC CGCCGGCGCG AGCGGCAGCT TCGAGCTCAA CGTCGCGATG
CCGGTCATCG CCCGCAACGT GCTGGAGTCC GCGCGCCTGC TGGCCGCGTC GTCCCGGGTG
CTGGCCGAGC GCTGCATCGA CGGCATCACC GCGAACGCCG AGCGGATGCG GCAGTACGCC
GAGACCTCAC CGTCCGTGGT GACGCCGCTG AACAAGCACA TCGGCTACGA GGCCGCGGCC
AAGGTGGCCA AGCGGGCGCT CGCCGAGGGC GCGACGATCC GCGAGACCGT GATCGCGATG
GGCTACGTCG AGCGCGGCGA GCTCACCGAG GCGCAGCTCG ACGAGGCCCT CGACGTGGAG
TCGATGACCC ACCCCTGA
|
|---|
| Protein sequence | MTLDDTADFR VEHDSMGEVR VPADALWRAQ TQRAVENFPI SGTPIEPALI HAIGRVKAAA
ATVNAELGVL DGEQAEAIVA AANAVAEGRH DGGFPIDVFQ TGSGTSSNMN ANEVIATLAQ
RAGTDVHPND HVNASQSSND TFPTAIHVAS TLAVTGDLLP GLAVLQASLQ RKADEFAGLV
KSGRTHLMDA TPVMLGQELG GYAATVRYAA ERLQSVLPRV RELPLGGTAV GTGINTPPGF
AERVIAVLGE TTGEPFTEAR DHFEAQGTRD SLVELSGVLR TIAVGLIKIC NDLRWMSSGP
TTGLAEIHLP DLQPGSSIMP GKVNPVLPEA TLMVCFQVIG NDAAVTAAGA SGSFELNVAM
PVIARNVLES ARLLAASSRV LAERCIDGIT ANAERMRQYA ETSPSVVTPL NKHIGYEAAA
KVAKRALAEG ATIRETVIAM GYVERGELTE AQLDEALDVE SMTHP
|
|---|
| |