Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0919 |
Symbol | |
ID | 4599602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 964472 |
End bp | 965458 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639775521 |
Product | peptidase C60, sortase A and B |
Protein accession | YP_922129 |
Protein GI | 119715164 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.372498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATGA CCCTCGAGAA GCCGGTGCGC CCGCGGCGGG CACTGCTCAA GGTGCCCGGA GCCGCGTCGC GGCCGGGCGG GAGCCGGAAG CAGCCGGAGC GACCGGCTCG TACGGCCCGG CGCCCCGCGC GCCCGGTGGG CCCGCCGACG GGCGCGGACG CCGCGTCGTC GGTGCTGTCA TCCGCGTTCA CGATGATCGC GATCGTCTGC CTGTGGGTGG CCGCGCAGCT GTTGTTCCTC GGCTCGATCT CCCAGAACCG GGCCCAGGAC CTGCTCTACG ACGAGCTCCG CGCCGACCTG GCGGCGGCGA CCGCGCCGCT CGGCCCGGTC GTGCCGGTGG GCGACCCGGT CGCGCTGCTG ACGATCCCGA GCATCGGCGT CGAGCAGGTG GTCGTCGAAG GCACCGCCTC CGGTGACCTG CTCGACGGCC CCGGCCACCG GCGCGACACC GTGCTGCCGG GCCAGGTGGG CACCTCGGTG GTCTACGGCC GCGCCGCCAC GTACGGCGCC CCCTTCGCCG ACCTGCCCGA CCTGCGGGCC GGCGACGAGG TCGAGGTCAC CGGGGCGCAG GGCCGGACGA CGTACACGGT CCTCGGCGTG CGTCGCGCCG GCGACCCCCT GCCGCAACCG GTCGCGGACG GCTCGGCGCG CCTGACGCTG GTCACCGCCG AGGGCAGCGG GCGCCTGGGG GCGATCACGC CGGAGTCCGT CGTGTACGTC GACGCCGATG CGACCAAGGC GTTCCCCGCA CCGCCCGGAC GACCCGGCGC GGTCCCCGAT TCGGAGAAGG CGATGGCCGC CGACGACGGA GCACTGCCGC TCCTCGCGCT GTGCCTGGCC CTCCTCCTGG CGCTGACCCT CGGGGTCGTC GCCGCTCGTC AGCGATGGTC GACGGCGCTC GTGTGGGTGG TCGCAAGCCC GCTCGCGATC GCGCTGTCCT GGGCCGCCAC GGATGTGGTG ATGCGACTGC TGCCCAACTT GATCTGA
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Protein sequence | MTMTLEKPVR PRRALLKVPG AASRPGGSRK QPERPARTAR RPARPVGPPT GADAASSVLS SAFTMIAIVC LWVAAQLLFL GSISQNRAQD LLYDELRADL AAATAPLGPV VPVGDPVALL TIPSIGVEQV VVEGTASGDL LDGPGHRRDT VLPGQVGTSV VYGRAATYGA PFADLPDLRA GDEVEVTGAQ GRTTYTVLGV RRAGDPLPQP VADGSARLTL VTAEGSGRLG AITPESVVYV DADATKAFPA PPGRPGAVPD SEKAMAADDG ALPLLALCLA LLLALTLGVV AARQRWSTAL VWVVASPLAI ALSWAATDVV MRLLPNLI
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