Gene Noca_0665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0665 
Symbol 
ID4599528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp705814 
End bp706992 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content75% 
IMG OID639775264 
ProductROK family protein 
Protein accessionYP_921878 
Protein GI119714913 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTCGAGA ACCGCGAGAC GGCCGCGCCG GCCACCGCCG GGGAGCTGCT CGAGCTCGTG 
CGCACCGGAC GGGCCAGCAC CCGCTCCCAG CTGCGTGCCC TCACCGGGCT GTCGCGGACC
GCCGTCACGG CGCGGGTCGG CTCGCTGACC TCCGCCGGGC TCCTGCTGCT CGGCGAGGAG
CTCGCCTCGA CCGGCGGCCG GCCTCCGGGC GCCCTGGTCT TCAACAAGGA CGCGGGCACC
GTCCTCGCGG CCGCGATCGG TCGGTCCCGG AGCCAGCTGG CGGTGCTCGA CCTCGACGGC
CAGGAGCTCT CGGCAGACTC GCGCGACCAC GAGGTCGGGG TCGGCCCGGA CGAGCTGATG
GCCGATGTCG TCGACCGGTT CCGAGGCCTG CTCGCGGGTG TCGAGCCACC GGTCCTCGGC
ATCGGGCTCA GCCTGCCCGG CACCCTCGAC CAGGCCCGAG GCGTGAGCAT CGGCTCCCCG
GTCATGTCCG GGTGGGACGG GGTGCCGCTG GCGCCGTACT TCGCCGATCT CGCGCAGGCA
CCGCTCTTCG TGGGCAACGA CGCCGACGTC TTGGCCCGCT CCGAGCTGCT GGGCGGTGCG
GGTGACCTCG GCGACGTACT GGTCGTGAAG GCCTCCACCG GACTCGGCCT CGGCATCATC
GCCGGAGGCC GGGTGCTCAG CGGGCATCTC GGGGCCGCGG GCGAGATCGG GCACACCAAG
GTCGACGCCG CCGGCGAACT GCCCTGCCGC TGCGGCGCGG CCGGCTGCCT GGAGACGATC
GCTGGCGGCT GGTCGCTGGT GGCCAAGATG GCCGAAGGCG GGCATCCGGT CGGCCACGTG
CGCGAGCTGG TCGCCCTCGC CCTCCAGGGC GACTCCGCCG CCCGGGGCCT GCTGCGCGAC
AGCGGCCGCG AGCTCGGTGA CCTGCTCGCC GTGGCGATCA ACCTGCTCAA CCCGGCCGCG
GTCGTCATCG GCGGCGACAT GGGCGCGGCC TTCGACTTCT ACCTCGCGGG GGTGCGCGAG
AGCGTCTACC GCCGGGCCGC GCCGCTGGCG ACCCGCGACC TGCAGTTCCT GCCGGCCACC
CACGGCGCCC GGGCCGGAGT CGTCGGCTGC GCGGCACTGG CTCTCGACCA CGTGCTGAGC
CCGGTCGCCA TCGACAGTCG GCTGGCCACC CAGGCCTGA
 
Protein sequence
MVENRETAAP ATAGELLELV RTGRASTRSQ LRALTGLSRT AVTARVGSLT SAGLLLLGEE 
LASTGGRPPG ALVFNKDAGT VLAAAIGRSR SQLAVLDLDG QELSADSRDH EVGVGPDELM
ADVVDRFRGL LAGVEPPVLG IGLSLPGTLD QARGVSIGSP VMSGWDGVPL APYFADLAQA
PLFVGNDADV LARSELLGGA GDLGDVLVVK ASTGLGLGII AGGRVLSGHL GAAGEIGHTK
VDAAGELPCR CGAAGCLETI AGGWSLVAKM AEGGHPVGHV RELVALALQG DSAARGLLRD
SGRELGDLLA VAINLLNPAA VVIGGDMGAA FDFYLAGVRE SVYRRAAPLA TRDLQFLPAT
HGARAGVVGC AALALDHVLS PVAIDSRLAT QA