Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0620 |
Symbol | |
ID | 4596037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 658209 |
End bp | 659132 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639775225 |
Product | LysR, substrate-binding |
Protein accession | YP_921839 |
Protein GI | 119714874 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGTACG TCCTGGCAGT CGCCGACGCC CGGAACTTCA CCAGGGCCGC GGAGCAGTGC TTCGTCGTCC AGTCAGCACT CAGCCAGCGC ATCGCCAACC TTGAGCGCGA GCTCGGCGTA GCGCTGTTCG CCCGCACCAG TCGCCGTGTC GAGCTGACCG CGGCTGGCCA GGCGTTCATC CCACCAGCGC GTCAGTGTCT TGAGGCTGCC GACCGGGCCG CAGCCGAAGC TGCTGCGGCC GTAGGGCAAG TGCGGGGTCG GCTCACCATC GGCGTGATCC CAAACGTGGC AGCCGTCGAC CTGCCCGATG TCCTACGGCG GGTCCGGGAG AAGTACCTTG CGGTTCGCAT CGAGTTGCGG GTCGGCGCAA GTGACTGGCT GGCAGAACAG GTTGTCGCAG GGAATCTCGA TGTTGCATTT CTGGGCCTCC CCGAGAACCA GAAGCCCGTC GGCGTGAGCT TCCGCGCATT GGCCAGCGAT CGCCATGTTG CGGTCCTACC GGTCGACCAC CATCTCGCGG GGCGCGCCGA GGTCGGCCTA GCGGACCTGT CCGACGAAGC GTTCGCGGAC TTTCCCTACG GTTCACCGGG CCGCGCCCAA GGAGATTATG CCTTTGCCTC CGCAGAGATC CGACGAGACG TCGCATACGA GGTCGTTTCC GCCGACCTGA TGCTGGATCT CGTCAGGCAT GGGCTTGCGG TGGCATTGCT GCCATCGATG TCCGTAAACC CCATGCCCGA GCTGGCCATC GTCTCAGTTA CTGACGGCCC TGGCCGCGTC GAGTACCTCG CTTGGAGCGA CTTCAATCCC AGCCCGGCGA CCCGTGCATT TCTCGACATT CTAGCGGACG AGGCAAGCCC GGGAACCGGG CACGACGTGC ATCGTTCCGC TTTACCAGCG ATCCGCGGAT CCGATCCGAC CTGA
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Protein sequence | MRYVLAVADA RNFTRAAEQC FVVQSALSQR IANLERELGV ALFARTSRRV ELTAAGQAFI PPARQCLEAA DRAAAEAAAA VGQVRGRLTI GVIPNVAAVD LPDVLRRVRE KYLAVRIELR VGASDWLAEQ VVAGNLDVAF LGLPENQKPV GVSFRALASD RHVAVLPVDH HLAGRAEVGL ADLSDEAFAD FPYGSPGRAQ GDYAFASAEI RRDVAYEVVS ADLMLDLVRH GLAVALLPSM SVNPMPELAI VSVTDGPGRV EYLAWSDFNP SPATRAFLDI LADEASPGTG HDVHRSALPA IRGSDPT
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