| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0456 |
|---|
| Symbol | |
|---|
| ID | 4597355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 485732 |
|---|
| End bp | 486844 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639775070 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_921685 |
|---|
| Protein GI | 119714720 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.965003 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTCG GGCGCCGGCG ACCGCTGGTC AGCGTGGTCG TGCCGGTGTA CGACGTCGCG
GCGTACCTGC CCGAGGCGCT CGACAGCGTG CTCGCGCAGA GCCACCGGAA CCTCGAGGTC
GTGGTCGTCG ACGACGGCTC ACCCGACGCC TCCGGCGTGA TCGCCGACGA GTACGCCGGC
CGCGACCCCC GGATCCGTGT GGTGCACACC GCGAACCGCG GCCTGGGGGC CGCCCGCAAC
GAGGGGATCC GGCACGCGAC CGGTGACCTG CTCGCCTTCG CCGACTCCGA CGACGTCGTG
CCTCGCGACG CCTACGCGGT CCTCGTGCGG CACCTGGAGC GCACCGGCTC CGAGTTCGTG
ACCGGCTCGG TCGCCCGCTG GGAGGCCGGC GTCCTCACCG AGCTCCCGTG GATGCGCCGG
CTGCACCGGG ACCGCGGCGC GTTCACGCTC GAGGAGCACC CCGAGCTGCT CGGTGACGTG
TTCGCGTGGA ACAAGCTGTT CCGCCGCTCC TTCTGGGACC GGGCCGAGCT GGCCTGGCCC
GAGGGCATCC GCTACGAGGA CCAGCCGACC ACGACCCGGG CGTTCGTCGC GGCGGAGCGG
TTCGGGGTGG TGCCGGAGGT CGTCTACCAC TGGCGGATCC GCCACGACGG CACCTCGATC
ACCCAGCAGC GGGCCTCTCT CGCCGACCTG CGGGATCGGT GGGAGACCAA GCGGATGGCG
CTCGCGAGCG TCGCGTCGCT CGGGTCGGAG CAGGTCGACG CGGTCTTCCA CGACCGGGTG
CTCGCCGGTG ATCTGCACCG CTACTTCGCC GAGATACCGG GGTGCTCCGA CCAGTGGTGG
GACCTGCTCG TGGCCGGCGT GCGCGAGTTC TGGGGCGACC GCTCGCTCGT GCACTCCGGA
CTGCCCCCGG TGCACCGGCT GACCGGCTGG CTGGTGGAGC AGGGCCGACG CGAGGAGGCC
GAGCTCGTGA TGCGGTACGT CGCAGCCCTC GGCGGCCCGG TGCCGCAAGT GGACGCGCCG
CACGGGCCGC GGATCGACGT ACCGGGCCTC GACCCGACCG GCGTCGATCC CGCGGCCCTC
GCGCTGCGGG ACTTCGAGGT GCGGGCTAGA TGA
|
|---|
| Protein sequence | MKFGRRRPLV SVVVPVYDVA AYLPEALDSV LAQSHRNLEV VVVDDGSPDA SGVIADEYAG
RDPRIRVVHT ANRGLGAARN EGIRHATGDL LAFADSDDVV PRDAYAVLVR HLERTGSEFV
TGSVARWEAG VLTELPWMRR LHRDRGAFTL EEHPELLGDV FAWNKLFRRS FWDRAELAWP
EGIRYEDQPT TTRAFVAAER FGVVPEVVYH WRIRHDGTSI TQQRASLADL RDRWETKRMA
LASVASLGSE QVDAVFHDRV LAGDLHRYFA EIPGCSDQWW DLLVAGVREF WGDRSLVHSG
LPPVHRLTGW LVEQGRREEA ELVMRYVAAL GGPVPQVDAP HGPRIDVPGL DPTGVDPAAL
ALRDFEVRAR
|
|---|
| |