Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2936 |
Symbol | |
ID | 3705365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 3321893 |
End bp | 3325054 |
Gene Length | 3162 bp |
Protein Length | 1053 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637739413 |
Product | acriflavin resistance protein |
Protein accession | YP_344911 |
Protein GI | 77166386 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGCTGT TTGTCCGGCA TCGGGTGGCG GCCAACCTGT TGATGGTGAT CATGATCCTT TCTGGAACCT GGGCGCTTTC TCAGCTTAAT CGGCAGTTTT TTCCCAATTT TGCCCTGGAT ATCATCACCG TGAGTGTGGT TTGGCGCGGT GCAAGCGCCG AAGACGTTTC CCGCTCTATC ACCGAGCGCC TTGAGGAAGA GCTTCGAGCT TTGGATGACC TTAAAAAACT CGATTCAACT TCAGCTTACG GCTTAGCTAC CCTGACCTTG GAATATTATG AAGGCACCGA TATGGGGATT GCCCTGGATA AGGTCAAAGA GCGAATAGGC CAAATCCGGG AGTTGCCCCT TGATTCGGAG ACCCCCGAGA TCCGCTTGGT GTCGCGCTAT GAAAATATCG CCCGGGTGCT GGTCACGGGT CCTGAAGATC CCCAGGAACT GCGGCGATTG GTGCATAAGT TTGAGAGGGA CTTGCTTAAT CGGGGAATTG CTAAGGTGGA TATTGCTGGA CTTCCCCAGC AAGAGATCGC TATCCAGATA CCGGTAGGGA ACCTGCGGGA GCTGGAAATG TCCTTGGGGC AAGTGGCTAA TCGGGTGGCG GATATCAGCC GGGATCTGCC GGCGGGCACC ATTGGTCGCG ATGATGTGGC CCGTCAGCTA CGTAGCCTAG ACCAGCGGCG GGATAGCCGG GCGTTTGCCG ATATACCGCT AACAGCGCAG AGTGATGGCC GTCTGATTCG TTTGGGTGAT GTGGCCACGA TTGAGCGCCG GGATCGGGAT GGAGAGACCC GGTTGTTTTA TCAAGGAAAA CCAGCGGTGG AGCTGCAACT AAAGCGCACT GAATCCGGAG ACTCGCTCCA AGGCGCCGAG ATTTTAATCC AATGGTTGCA AGCCGTGCGT CCCACTTTAC CAGAAGGCAT TAAGCTACAC CTCTTCGATC AATCCTGGGA ATTGGTGAAG GAACGTATCG GGTTGCTGCT CAAAAATGGC GGCGGCGGTT TAGTCTTGGT AGTCGGTATC CTTTTTCTAT TTCTCAGCGG CCGGGTCGCC ATTTGGGTAG CCATCGGGAT TCCCGTCTCT TTCCTGGCGA CCCTGGCAGT TCTCTGGGTT GCGGGTGGCA GCATCAACAT GATCAGCTTG TTCGCCTTGA TCATGGCCCT TGGAATCATC GTTGATGATG CCATCGTGGT GGGTGAAGAT GCCCTCGCCC AGCATCAGCA GGGGCTATCC CCATTGGCGG CGGCCGAGGG CGGTGCCCGC CATATGCTCC TGCCGGTTCT CGCCTCATCC TTAACCACCG TTGCCGCTTT TCTCCCCTTG ATGCTCATAG GCGATGTGAC CGGTAACATT CTATTCGATA TCCCCCTGGT GGTGATCTGC GTCATTCTGG CCTCTTTGGT TGAAAGTTTT CTCGTGTTGC CTGGCCACCT GCGGTATAGC TTCGAGAAAA TGAAAATTGG CCGGGAAGGC AAGGTTCGTT TGCGGCTGAA TCAGGTTTTT GACCGTTTCC GGAAGCGGAT TTTCCGGCCC CTGGCTCTGT TTGCGATTCA GAACCGGTGG ATTACCGTGA GCGCGGCCTT GGGGCTGTTG CTGGTAGTTT TGGGTCTGTT GCTTGGGGGG CGCATCAGTT TTACTTTCTT TCCCTCTCCC GAAGGTAAAG TCGTTTATGC TAATACCAGT TTTGCGCCCG GCACCCCGCC TCAAAGAGTT GCGGCTTTTA TTATGGAGCT GGAACGGACG CTCTATGATA CGGAGGCGGC TTTCGGGCAA GACTTGATTG TGGCTTCCAT TGTAAAGCTG GGTTCAGCGA CCACCGCCGG GGGCCGGGCC GCCCGTAATG GGGATCGCTT TGGCTCCATT ACCGTGGAGC TCGTTTCCCC CGACCGGCGC GAAGTGCGGA ATCAAGCTTT TATCCAAGCC TGGCAAGAGC GGATCAAACT GCCGCCCGGT ATTGAGAGTT TTACGCTGTC CGAACGGCAG ACGGGACCAC CCGGCCAAGA TTTAGATATT GTCTTACTAG GGGAAGATGA ACGGGCCTTG AAAGGGGCGG CGGTAGAATT GGCGGAGGCC TTAAGCAAGA TCCCCGGCGT CTCCGCGGTG GAAGATGATC TGCCTTACGG CCAAGAGCAA CTCATTTACC GTTTGACTCC AGAAGGCCAG TCCCTGGAAC TTACGGTAGA GGCCGTGGGC AGGCAACTCC GGGCGGCCTA TGAAGGCCGG CTGGTGCAGA TATTTCAGGA CGGGGGAGAT GAAATTGAGG TGCGGGTGCT CCTGCCCGAC AATGAACGCT ATCGTCTGGC CAGTCTCACC CACCTGGCTA TCCAGCTTCC CAATGGCGGT ATCGCGCCCT TGGATACGGT AGTCGATTTA GAGTCCCGGC GGGGATTTGA TGTCCTGCGT CATACCCAGG GTAAGCTGGC AGTTCATGTC TCCGGGAATG TGGATCGGAA AGTCAACAAC AGCAACCGCA TTCTCGCTGG ACTAGAACAT AGTTTTTTGC CGGAGCTCCG CACCCGCTAT GGAATTCAAA CCCTGTTTGA GGGCCGGGCC GAGGAACAGC GGGATACCCT CGGCGATATG CAGCATGGGC TGTTGTTGGC GCTGGCCATG ATCTATTTAA TTCTGGCTGG GGTGTTTTCT TCCTACGGCT GGCCTTTAGT GGTTATGGCT GCCATTCCCT TCGGTTTGAT TGGGGCTATT CTGGGCCATT ATGTCATGGG GATCGATCTC ACGATTTTGT CCTTGTTTGG TTTCTTCGGT CTTTCCGGTA TCGTGGTGAA TGATTCTATT ATTTTAGTCA CCTTTTACAA GCAACTCCGG GAACAGGGTC ATCCCTGTGA CATCGCCTTG GTGGAAGCGG CCTGCCAACG TCTGCGGGCT GTTTTGTTGA CTTCCTTGAC CACCATTGCT GGTTTGACGC CTTTACTCTT TGAGCGCTCT TTCCAGGCTC AGTTTTTGAT CCCCATGGCG GTCTCCATTT CTTTTGGTTT GATGTTTTCT ACCGTGCTGG TGCTATTGGT TATTCCCGCC TTGCTCTCCA TTTATGAGCG TACGTTGCTC TGGTTTAAAC CATCCCCGGA AGAGGATATT GCCTCGGAGC CCGAAGTCGC CGCAGATGCC GGGCAAGCCC CTGTTCGCCG TTTATCGGGT ATTTCCGAAT AA
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Protein sequence | MGLFVRHRVA ANLLMVIMIL SGTWALSQLN RQFFPNFALD IITVSVVWRG ASAEDVSRSI TERLEEELRA LDDLKKLDST SAYGLATLTL EYYEGTDMGI ALDKVKERIG QIRELPLDSE TPEIRLVSRY ENIARVLVTG PEDPQELRRL VHKFERDLLN RGIAKVDIAG LPQQEIAIQI PVGNLRELEM SLGQVANRVA DISRDLPAGT IGRDDVARQL RSLDQRRDSR AFADIPLTAQ SDGRLIRLGD VATIERRDRD GETRLFYQGK PAVELQLKRT ESGDSLQGAE ILIQWLQAVR PTLPEGIKLH LFDQSWELVK ERIGLLLKNG GGGLVLVVGI LFLFLSGRVA IWVAIGIPVS FLATLAVLWV AGGSINMISL FALIMALGII VDDAIVVGED ALAQHQQGLS PLAAAEGGAR HMLLPVLASS LTTVAAFLPL MLIGDVTGNI LFDIPLVVIC VILASLVESF LVLPGHLRYS FEKMKIGREG KVRLRLNQVF DRFRKRIFRP LALFAIQNRW ITVSAALGLL LVVLGLLLGG RISFTFFPSP EGKVVYANTS FAPGTPPQRV AAFIMELERT LYDTEAAFGQ DLIVASIVKL GSATTAGGRA ARNGDRFGSI TVELVSPDRR EVRNQAFIQA WQERIKLPPG IESFTLSERQ TGPPGQDLDI VLLGEDERAL KGAAVELAEA LSKIPGVSAV EDDLPYGQEQ LIYRLTPEGQ SLELTVEAVG RQLRAAYEGR LVQIFQDGGD EIEVRVLLPD NERYRLASLT HLAIQLPNGG IAPLDTVVDL ESRRGFDVLR HTQGKLAVHV SGNVDRKVNN SNRILAGLEH SFLPELRTRY GIQTLFEGRA EEQRDTLGDM QHGLLLALAM IYLILAGVFS SYGWPLVVMA AIPFGLIGAI LGHYVMGIDL TILSLFGFFG LSGIVVNDSI ILVTFYKQLR EQGHPCDIAL VEAACQRLRA VLLTSLTTIA GLTPLLFERS FQAQFLIPMA VSISFGLMFS TVLVLLVIPA LLSIYERTLL WFKPSPEEDI ASEPEVAADA GQAPVRRLSG ISE
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