| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2894 |
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| Symbol | |
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| ID | 3707448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 3271191 |
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| End bp | 3272423 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637739370 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_344870 |
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| Protein GI | 77166345 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.196755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCTT TTCATTACAA AGCATCAACT TCAGCAGGAG AAATCCTGGA AGGGGAGCGC
CGGGCGGACG ATGAAGCCAG CGTAGTCGAG TGGCTCCATT CCCAGGGTTA TATTCCCATT
CGTATTGAGG AGGGGACTGC CGGAGGCCGG GGCCGATCCC GGCGATCAGC CGGAAAGCGC
TTGTTCGGGC GCAAGAAAAC GGTTCGTCAG AACGAAGTGG CGGTACTGAC TGGAGAGCTG
GCGACCCTAT TGCGGGCTGG CCTTCCTTTG GACAGGGCCT TTAGTATTTT GATGGAGATT
GCCGATGATG GACCTGTAAG GCAACTTTTA AGCCAGCTTC AAGAGCAGGT AAGGGGAGGG
TCTTCCCTGG CGGAAGCCAT GGAAACCCAG GCCGAAACTT TTTCTCCCCT CTATATCAGC
ATGATTCGCG CGGGCGAGGC GGGAGGCGCT TTGGATGTGA TCCTGGGGCG GCTCGCCGAT
TTCATGGAAC GCTCCAAAGC ATTGAAAAAC GCGGTCACTT CGGCCCTCAT TTATCCTGCT
ATTTTGGTGG GCGTTGCCGG TCTTTCCGTC ATTATTCTCT TAACTTTTGT GGTTCCCCAG
TTCCAGCAGC TATTTGAAGA CGCGGGTAAA GCCTTGCCGG TGGCTACCCA GATCGTGATT
GCCGCGGGTA ATCTTCTGCA AAATTATTGG TGGGCGCTGT TACTGGGTTT TCTGGCCATC
TTATTGTTTA TGCGTCATCA GCTACAAATC CCGGAACGCC GTTATCGCTG GGATGGCTGG
TTGCTGCGGC TGCCCCTGGT GGGCGACTTG ATCGCCAAGC TGGAAGTGGC GCGTCTCTCT
CGCACCTTGA ATAGCTTGCT GCTAAATGGA GTGCCTTTGC TTTCGGCGCT GGCGATTATC
AAGAATACCT TGAACAATCA GGTGATGGCG GAAGCTCTAA GCGAGGTCGC CGACGCCCTG
CGCCAAGGCC ATGGAATGGC TGATCCCTTG CTGGAGACGG CCTTATTTCC CAAAATGGCG
GTGCAAATGA TTAAGGTGGG GGAAGAAACA GGCCAATTAG AGGATATGCT CGGTCAGGTC
GCCGAGGCTT ATGATCTGGA AGTGGAATCG ACGATTAAGC GCCTATTGGC CTTATTGGAA
CCCGTCCTGA TCCTGACCCT GGGTGTCGTC ATCGCCGGGA TCATTATGTC TATATTGGTC
GCTATTTTGA GTGTTAATGA ATTGGCGTTT TAA
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| Protein sequence | MAAFHYKAST SAGEILEGER RADDEASVVE WLHSQGYIPI RIEEGTAGGR GRSRRSAGKR
LFGRKKTVRQ NEVAVLTGEL ATLLRAGLPL DRAFSILMEI ADDGPVRQLL SQLQEQVRGG
SSLAEAMETQ AETFSPLYIS MIRAGEAGGA LDVILGRLAD FMERSKALKN AVTSALIYPA
ILVGVAGLSV IILLTFVVPQ FQQLFEDAGK ALPVATQIVI AAGNLLQNYW WALLLGFLAI
LLFMRHQLQI PERRYRWDGW LLRLPLVGDL IAKLEVARLS RTLNSLLLNG VPLLSALAII
KNTLNNQVMA EALSEVADAL RQGHGMADPL LETALFPKMA VQMIKVGEET GQLEDMLGQV
AEAYDLEVES TIKRLLALLE PVLILTLGVV IAGIIMSILV AILSVNELAF
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