Gene Noc_2561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2561 
Symbol 
ID3704564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2913403 
End bp2913930 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content45% 
IMG OID637739040 
ProductNADH dehydrogenase (ubiquinone), 24 kDa subunit 
Protein accessionYP_344544 
Protein GI77166019 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID[TIGR01958] NADH-quinone oxidoreductase, E subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGTAG GACAGCCAGA ACGGAGAAAA TCAAGAAATC GAGAAGAAGA AAATCTTCTC 
TCCTCTGAAG TACGGCAGCA AATTGATTAT TGGATCGCAA AATATCCTCC GGAGCGAAAG
CAATCTGCGG TTATTCCCGC CTTGCATATC GTGCAAGCAG TTAATGGAGG TTATTTGACT
GATAAACTTT TGGATGCGGT AGCTGAATAT CTGGAGATGC GTCCGATCAG TGTTTATGAA
GTGGCTACAT TCTATTCTAT GTATGAATTA AAGCCAATCG GCCGGCATAA AATCAGTGTT
TGCACTAATA TTTCATGCCA GCTTAGTGGC TCTGATGAGG TCGTGGCCCA TTTACAGAAA
CGCTTAGGGA TCGGTTTCGG GGAGACGACG CCGGATCATC GTTTTACGGT TAAAGAAGCT
GAATGCCTGG GCGCTTGTGG TGGGGCACCC ATGATGATGG CAGGGCATAC CTATCATGAA
AATTTAACCT CAGAAAAGAT CGATCAAATC CTTGAGGCTT TAAAATGA
 
Protein sequence
MSVGQPERRK SRNREEENLL SSEVRQQIDY WIAKYPPERK QSAVIPALHI VQAVNGGYLT 
DKLLDAVAEY LEMRPISVYE VATFYSMYEL KPIGRHKISV CTNISCQLSG SDEVVAHLQK
RLGIGFGETT PDHRFTVKEA ECLGACGGAP MMMAGHTYHE NLTSEKIDQI LEALK