Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2538 |
Symbol | |
ID | 3704694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 2889675 |
End bp | 2889944 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637739017 |
Product | AbrB family transcriptional regulator |
Protein accession | YP_344521 |
Protein GI | 77165996 |
COG category | [K] Transcription |
COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0127066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAACGA CTCTTACCAG TAAAGGCCAA GTTACGGTGC CGAAGAAGAT TCGCGATTAT CTCGGCTTGC GCCCAGGATC AGCGGTTGAT TTTTCCCTTG GACCCCACGG CGAAGTGATC CTGCGTCCGG CGGAAGATAC CCCACCAGAA CGCCGCAAGG ATCGTTTCGG CAAGCTGAGA GGTACGCTCG ATACCGGCAG GACTACCGAT GAATGGATGC ATTTACTGCG TGGCTACGAT GCTGACGCAA GTGATCCTGG CCTGAAATGA
|
Protein sequence | MATTLTSKGQ VTVPKKIRDY LGLRPGSAVD FSLGPHGEVI LRPAEDTPPE RRKDRFGKLR GTLDTGRTTD EWMHLLRGYD ADASDPGLK
|
| |