Gene Noc_2480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2480 
Symbol 
ID3704618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2825608 
End bp2826648 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content54% 
IMG OID637738959 
Productglycosyl transferase, group 1 
Protein accessionYP_344463 
Protein GI77165938 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.197524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGACCC TGGCAGGAGG ATTCGCCGAG CGCGGTTTGC GTGTAGATTT GATCCTGGCC 
AATGCAGAGG GGCCCTATCT TAGCCGGGTT CCTGACGCAG TTCGTGTAGT GAACTTGGAG
GCTTCCCGTG TGATAAAAAG CTTGCCGGGT TTGATGCGTT ATTTACGGCG GGAGCAGCCC
CAAGCCTTGC TGTCAGCTTT AGACCACGCC AATCTTATCG CGTTATTGGC CAAGCGGTTG
ACAGTCTCTA AGGCCCGTTG CGTAGTCAGT GTACATAGTA CGCTTTCTAT CGAACAACGC
CATGCTAGGG TCTGGCGCGC CCGCCTTATT CCTTGGCTTA TCAGCCGCTG GTATCCAAGG
GCTAATAAAG TTGTGGCTGT TTCCCAGGGG GGTGCTAAAG ACTTGATCCA CACGACGGGC
TTGGCCCCGG AGAGAGTTGA AGTTATTCAT AATCCTGTGG TGATTCCGGA TTTGTTAGCC
CAGGCTCAAG CCCCTATCCC ACATTTCTGG TTGGGAGCCG AGCAGCCCCC GGTGATTCTC
GGCATAGGAC GATTGACGGC GCAAAAAGAT TTCCCGACCC TTATCCGAGC TTTTGCTCAG
GTTCGGGAAC GGCGTCTGGC ACGGCTTATC ATCCTGGGCG AAGGGGAAGA ACGTTCAAAA
TTAGAGGCCC TGCTCGGGGC GTTGAATCTC CAAGATGAAG TGGCCTTACC TGGTTTTGTC
CAAAATCCTT ACGCTTATAT GAGCCGGGCT GCGGTGCTTG TGCTGTCCTC GGCCTGGGAG
GGTTTACCGG GAGTTTTGAT GGAAGCCCTA GCGGTGGGTA CACCGGTGGT TGCAACTGAC
TGCCCTAGTG GGCCCAATGA AATTCTTTGC GGTGGAACCT ATGGACCCTT GGTTCAAGTG
GGGGATGATG TTTCCATGGC AGAGGCAATT ATGCATATTT TAGAGGGGCG AAGGCTCACA
GCTCCAGTAT TGAGGGGGCG GGCTGCGGAT TTCAGCCTAG AGCGGGCCAT AACCGCCTAT
CTTGAGGCCC TCAATCTTTA A
 
Protein sequence
MLTLAGGFAE RGLRVDLILA NAEGPYLSRV PDAVRVVNLE ASRVIKSLPG LMRYLRREQP 
QALLSALDHA NLIALLAKRL TVSKARCVVS VHSTLSIEQR HARVWRARLI PWLISRWYPR
ANKVVAVSQG GAKDLIHTTG LAPERVEVIH NPVVIPDLLA QAQAPIPHFW LGAEQPPVIL
GIGRLTAQKD FPTLIRAFAQ VRERRLARLI ILGEGEERSK LEALLGALNL QDEVALPGFV
QNPYAYMSRA AVLVLSSAWE GLPGVLMEAL AVGTPVVATD CPSGPNEILC GGTYGPLVQV
GDDVSMAEAI MHILEGRRLT APVLRGRAAD FSLERAITAY LEALNL