Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2309 |
Symbol | |
ID | 3704535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2657514 |
End bp | 2658050 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637738788 |
Product | ribosomal protein L6 |
Protein accession | YP_344297 |
Protein GI | 77165772 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000583709 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAGAA TTGCTGATAA TCCCGTGTCG ATCCCGAAGG GGGTCGAAGT CACGCTTTCT GGGGATAATG ACATTAAGGT AAAGGGTGCA AAGGGTTCTC TTGCTTTTGC TATTCATCCC TTGATACAGG TAGTCCAAGA TGGGGAAACG CTACGCTTTT CAGCGAAGAG TACAGATAAG CGAGTAAATG CTCTTAGAGG TACGACCCGC GCCCTAATAA ATAATATGGT ACAGGGAGTT AGCCAAGGCT TTGAGCGGCG TTTGCAGCTA GTTGGGGTGG GTTACCGGGC GCAGCTACAA GGGCGGAAGC TTGTGCTTAG TTTGGGTTAT TCTCATCCCG TTGAATTTAC TGCGCCAGAG GGTCTTACTA TTGAGGTACC TAGTCCGACC GAAATCATCG TCAAAGGATA TGATAAGCAG CAAGTCGGAC AGGCTGCGGC GAACATTCGC AGATTCAGGC CACCTGAACC TTATAAGGGA AAAGGGGTTC GCTATGCAGA CGAAGTAGTT GTGCGCAAGG AAGCGAAGAA AAAATAG
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Protein sequence | MSRIADNPVS IPKGVEVTLS GDNDIKVKGA KGSLAFAIHP LIQVVQDGET LRFSAKSTDK RVNALRGTTR ALINNMVQGV SQGFERRLQL VGVGYRAQLQ GRKLVLSLGY SHPVEFTAPE GLTIEVPSPT EIIVKGYDKQ QVGQAAANIR RFRPPEPYKG KGVRYADEVV VRKEAKKK
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