Gene Noc_2128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2128 
Symbol 
ID3704932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2451338 
End bp2452513 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content52% 
IMG OID637738604 
Productaminotransferase, class V 
Protein accessionYP_344118 
Protein GI77165593 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATTA CTTCCTTTCA TCCTCCCGCC CGTATTCTTA TGGGACCGGG CCCGTCCGAT 
GTGAATCCCC GTATTCTTGA GGCCATGTCC CGGCCAACGA TAGGCCACTT AGATCCAGTC
TTTATTGCCA TGATGGATGA AATGAAGACT CTCCTGCAAT ATGCTTTTCA AACCAAAAAC
GAACTGACTT TCCCTGTTTC CGCGCCAGGC AGTGCGGGGA TGGAAATCTG TTTTGTGAAT
CTGCTGGAGC CGGGCGATAA GGTTATCATT TGCCAAAATG GCGTATTTGG TGGGCGGATG
AAGGAAAATG CCGAGCGTTG TGGCGCGATC CCTGTCCTCG TGGAGGATAC TTGGGGTGCA
GCTGTAGATC CCAATAAGCT TGAAGAAACT CTTAAATCTC ATCCAGATAC TAAGGTAGTG
GCTTTTGTCC ATGCGGAAAC TTCTACCGGC GCTTGTTCCG ATGCGAAGAC GCTCGTGGAA
ATAGCGCGTC GCCACGGTTG CTTAACGATA GTGGATACGG TGACATCGCT TGGGGGTAGT
CCCGTGAAGG TAGATGAGTG GGGCATCGAT GCCATTTATT CCGGGAGCCA GAAATGTCTT
TCCTGTACCC CCGGATTATC GCCAGTAAGT TTTAACGAGC GGGCTATTGA GCGAATTCGG
GCTCGACAAA CCAAAGTACA GAGTTGGTTT CTCGATTTGA GTCTGGTAAT GGGTTATTGG
GGAGGGGATG GCAAGCGTGC TTATCACCAC ACCGCGCCTA TTAATGCTCT TTATGGACTC
CATGAGGCGT TGGTTGTTTT GCAGGAAGAA GGTTTGGAAA ATGCTTGGGA GCGCCATCAG
CGTAATCATC AAGCCCTGCG GGCGGGTATT GAAGCAATGG GATTACAGCT TGCAGTCAAG
GAAAAGGAGC GACTTCCCCA GCTCAATGCA ATCACTATCC CGGCGGGTGT TGACGATGCT
GCAGTGCGCG CCCGGCTGCT GCAAGAATAT GGCTTGGAAA TTGGGGCGGG TTTAGGTGAA
ATGGCGGGAA AACTTTGGCG TGTTGGTCTG ATGGGTTATG GCTCTAATCC GCGCAATGTA
CTGATCTTTT TGGGGGCTTT GGAGACGGTG CTTCATGATT TGGGGGCCAG TATCGAGTCA
GGGGTTGCCG TGAGAGCCGC CCGGGCGGCT TGGTAG
 
Protein sequence
MSITSFHPPA RILMGPGPSD VNPRILEAMS RPTIGHLDPV FIAMMDEMKT LLQYAFQTKN 
ELTFPVSAPG SAGMEICFVN LLEPGDKVII CQNGVFGGRM KENAERCGAI PVLVEDTWGA
AVDPNKLEET LKSHPDTKVV AFVHAETSTG ACSDAKTLVE IARRHGCLTI VDTVTSLGGS
PVKVDEWGID AIYSGSQKCL SCTPGLSPVS FNERAIERIR ARQTKVQSWF LDLSLVMGYW
GGDGKRAYHH TAPINALYGL HEALVVLQEE GLENAWERHQ RNHQALRAGI EAMGLQLAVK
EKERLPQLNA ITIPAGVDDA AVRARLLQEY GLEIGAGLGE MAGKLWRVGL MGYGSNPRNV
LIFLGALETV LHDLGASIES GVAVRAARAA W