Gene Noc_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2011 
Symbol 
ID3705201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2320326 
End bp2321186 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content61% 
IMG OID637738488 
ProductCBS domain-containing protein 
Protein accessionYP_344003 
Protein GI77165478 
COG category[S] Function unknown
[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains
[COG5502] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCTTT ACTGGTATCG CCGGCCACGG CTCGTGGTCC TCAGTTCGAA GAGTTCTGTG 
CTGGAAGCAG CACGTGCCAT GGAGAATAAT AGTATCGGCG CCATCGTGGT GCAGGATCAT
GGGCGTATCG TCGGCATCGT GACTGACCGG GATCTCGCCG TGCGTGCGCT GGGCCACAAG
CTCGATCCCG AGAATACGGC CATCACCGAG GTGATGACCC CTTCGCCGTT GATGCTGACT
CTCGCGGACA GCCGTGAGGA GGCGATAGCG CTCATGCAGC AAGGCAACGT CCGGCGTATC
CCGCTCAGCG AGAACAACCG GGTCGTGGGT ATGGTGACGC TCGATGATCT GCTACTCGAT
GAGGCCGCAC CGTTGGAGGA GTTGGCTGCG ATCGTCCAGG CGCAAATCGG AGAAGGCGGC
CCAACCGAAA GTCCTCGATC ACCGGCGCGC CGACGGAGCC TCGCTCGGGC CGAGGCGACA
CTGTCGCGAT TGATTAACGC GGTACAGACG GAGACGGGCC TTGAGGATCG GCAACAGGCG
CGGATCGCCG TCGAGACTAT ACTCGCGTTG TTGGTCCGGC GAGTCACGCC TGGAGAGGCG
AAGGATCTCA TCGCGCAGCT CCCATCGTTG TTGCAATCGC CGCTGCGTGC GCTACAGCCA
GGTCCGGACA AATCCATTAC CCGGGAGACC GCCATTACTG AATTGTCTCA ACAGCTGGGG
TTGGATACGG CACGGGCTGA AGAGGTGATC GGCACGATCG CAAAGGCAAT TAGCCCGGGT
CAAGTGGAGG ATCTTAGACG CCAGCTTCCA GAGGATCTGC GTAGTCTGCT CGTGCTTCCC
GATCCTATCG ATACGGCGTG A
 
Protein sequence
MPLYWYRRPR LVVLSSKSSV LEAARAMENN SIGAIVVQDH GRIVGIVTDR DLAVRALGHK 
LDPENTAITE VMTPSPLMLT LADSREEAIA LMQQGNVRRI PLSENNRVVG MVTLDDLLLD
EAAPLEELAA IVQAQIGEGG PTESPRSPAR RRSLARAEAT LSRLINAVQT ETGLEDRQQA
RIAVETILAL LVRRVTPGEA KDLIAQLPSL LQSPLRALQP GPDKSITRET AITELSQQLG
LDTARAEEVI GTIAKAISPG QVEDLRRQLP EDLRSLLVLP DPIDTA