| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1955 |
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| Symbol | |
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| ID | 3704969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2239876 |
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| End bp | 2241282 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637738431 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_343947 |
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| Protein GI | 77165422 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | [TIGR03097] probable O-glycosylation ligase, exosortase system type 1-associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.324728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTTTC GCGATATCCT GATCACAGGG GTTATTTTTG CCTTGCTGCC TGTTTGTTTT
TTACGTCCAT GGATTGGTAT TTTAGTATGG ACATGGATAA GCATTATGAA TCCTCATCGG
TTGACGTGGG GTTTTGCTTG GGATATGCCC TTTGCGCAGT TAGTGGCGAT TGCGATATTA
GGGGGAATGC TGCTGGTGCG AGATAGGAAG TCTATTGCCT GGACACCTGA ACTTCGACTC
TTATTGGTGC TTTTTGGGTA TATGACTTTT ACCACGTTCT TCGCCTGGGC ACCTGATGCT
GCTTGGCAAC AGTGGGATAA GGTGGCAAAG ATTTTTTTAA TGAGTTATGT AACGACGATA
CTCATCTATG GCAAACAGCG GATTTATTGG CTGCTTCTAG TCGCAACTCT GAGTCTAGGT
TTTTATGGCT TTAAAGGTGG TCTATTTACC ATTCTTACAG GTGGGCAATT CCATGTAATG
GGACCACCTA AGTCTTTTCT AGCAGGTAAC AATTTTCTAG GGCTAGCTAT GGTAATGGGA
TTGCCTCTTC TTTTGGTTTT TGCACAACAG GAAGCGCGAG TTTGGTTTCG TCGGCTTTTA
TATGCCACTT TTGCCCTTAC CTTTATTGCA GTTCCCTTCA CTTATTCACG AGGCGCGATG
TTGGGGCTTG CAGTAGTTTC TGTGCTGCTG TTTATGAGAT GGCGTAATAA AGCCTTGCTG
GTTATTATGC TCATACCTAT ACTCTTTGGC GGCTTAGCAT TTGTCCCCGA AAAGCTATTT
AATCGGGCGG AGAGCATTCA AAACTATGAA ATGGACGCCT CGTCGATGCA GCGTATTGCG
GCATGGGACC TTGCTTGGAA TATCGCAATT GATAGACCCT TGCGCGGGGG GGGGTTTGAG
TATGAAGGCG ATACTGCTCG GTGGCATACT TATCTTGATC CTAAATATTA TTATGTAATG
GAAGGCGCTC ATGTAGCTCA TAGCATTTAT TTTCAGATGC TAGGACAACA TGGTTTTGTT
GGCCTCAGTC TATTTATGAT AATTTTGTTC CTGACTTACC GACGGTTGGG ACGGCTTAAG
AAATGGACTT TAGAAATCTC TGATTTGCGG TGGATAGGAC AATATGCGTG GGCGCTGAGG
GTTGGCCTTG TTGGATACGC TGTTACAGGA GCTTTTTTGA ATCTAGCTTA TTTCGATCTT
TATTATCTCT TTGTCGTCTT AGCAGCATTG CTCTGGCGGG AGGCTTTGTC TGATGAGCGG
ATAGCTAGTC GCCGTTCAGC TACAGCCTTT ACAGGTAAAG GGGTGCGCTC TGATTGGCAC
CCCCCTCCTA GGGTAGGTAA GGGATCTTTT TCGAGCAAGA GCCAGAGCGA AAGCTTTCCT
GAAGAGAGCT CTGGAAGACA TCTATGA
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| Protein sequence | MPFRDILITG VIFALLPVCF LRPWIGILVW TWISIMNPHR LTWGFAWDMP FAQLVAIAIL
GGMLLVRDRK SIAWTPELRL LLVLFGYMTF TTFFAWAPDA AWQQWDKVAK IFLMSYVTTI
LIYGKQRIYW LLLVATLSLG FYGFKGGLFT ILTGGQFHVM GPPKSFLAGN NFLGLAMVMG
LPLLLVFAQQ EARVWFRRLL YATFALTFIA VPFTYSRGAM LGLAVVSVLL FMRWRNKALL
VIMLIPILFG GLAFVPEKLF NRAESIQNYE MDASSMQRIA AWDLAWNIAI DRPLRGGGFE
YEGDTARWHT YLDPKYYYVM EGAHVAHSIY FQMLGQHGFV GLSLFMIILF LTYRRLGRLK
KWTLEISDLR WIGQYAWALR VGLVGYAVTG AFLNLAYFDL YYLFVVLAAL LWREALSDER
IASRRSATAF TGKGVRSDWH PPPRVGKGSF SSKSQSESFP EESSGRHL
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