Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1603 |
Symbol | gltD |
ID | 3705726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1785513 |
End bp | 1786955 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637738079 |
Product | glutamate synthase subunit beta |
Protein accession | YP_343608 |
Protein GI | 77165083 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.879773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAAAC CCACTGGATT TATGGAAATT CCCCGCCGCG ATCGGACCGA GGCGCCGGTC GCGGATCGGG TACAACATTT CCGAGAATTT GCCATTCCCC TCAGCGAAGG GGAAGTGAGG GAGCAAGGGG CCCGCTGCAT GGATTGCGGT ATCCCTTTTT GCCACCCCGC CTGTCCCGTT AATAACATTA TCCCCGACTG GAACGATCTG GTGTACCGGG ATGATTGGCG CCGCGCCCTG GAAGTGCTCC AGTCCACCAA CAATTTCCCG GAGTTCACGG GCCGCATCTG CCCTGCACCT TGCGAAGCAG CCTGTACTCT CAATCTGACC GACGAGCCAG TCACCATTAA AACCATCGAA TGCGCTATTA TCGACAAGGG CTGGCAAGAA GGCTGGATCA GGCCGCAAAT ACCCACCCAT AAAACGGGAA AGCGGGTAGC CGTGGTCGGC TCGGGTCCGG CGGGACTTGC CTGCGCCCAA CAATTGGCCC GGGTGGGTCA CCAAGTCGAA GTCTTTGAAA AAAACGACCG GATCGGTGGC CTGCTGCGCT ATGGAATCCC GGATTTTAAA ATGGCCAAAT CCCTTATCGA CCGGCGCATG GCCCAAATGC AGGCGGAAGG CGTGGCCTTT CACCCCAATA GCCATATTGG GGTCAACACA CCAGCCCGCT CACTGCTGGA AACCTTCGAT GCCCTGGTCC TCACGGGCGG TTCCGAGGAC CCGCGGGATC TCCCCATTCC AGGACGGGAA CTCAGGGGCG TTCATTTCGC CATGGATTTC CTGACCCAGC AAAATCGCCG CGGGGCGGGG ATCAGCCTCC CTAACCAAGC GCCTATCAGC GCCAAGGACA AGCATGTGAT TGTCATCGGT GGCGGCGACA CCGGTTCGGA CTGCATAGGG ACTTCTTTTC GCCAGGGGGC GCTTGCCGTC ACCCAACTAG AAATCATGCC CCAGCCGCCG GAAAAGGAAA ATAAACTACT CACTTGGCCC AACTGGCCCT ATAAGCTTCG CACCTCCAGT TCCCAGGCAG AAGGGGCCTC CCGGGATTGG GCCGTGGCCA CCAAAACCTT CCGGGGCGAA AACGGGCAAG TCACCGCCCT CCAGCTAGTG CGTCTTAAGT GGCATCAAAA TCAGCAAGGG CATTGGAAAA TGGAGGAGGT GCCTAACAGC GAATTCGAAC TGCCTGCGGA TTTAGTGCTG CTGGCTATGG GCTTTGTCCA TCCGGTGCAT GCAGGTCTAT TGGAGGAACT CGGCGTTGCC CTCGATGGAC GGGGTAACGT GGAAGCCGAC ACTGAACGCT ACCAGACTTC AATCCCGAAG GTCTTTGCCG CCGGCGATAT GCGCCGCGGT CAATCCCTCG TGGTATGGGC CATTCGCGAA GGCCGCCAGG CGGCCCAGGC CGTGGATGAA TTTCTCATGG GTTACTCGGA CCTGCCCCGG TGA
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Protein sequence | MGKPTGFMEI PRRDRTEAPV ADRVQHFREF AIPLSEGEVR EQGARCMDCG IPFCHPACPV NNIIPDWNDL VYRDDWRRAL EVLQSTNNFP EFTGRICPAP CEAACTLNLT DEPVTIKTIE CAIIDKGWQE GWIRPQIPTH KTGKRVAVVG SGPAGLACAQ QLARVGHQVE VFEKNDRIGG LLRYGIPDFK MAKSLIDRRM AQMQAEGVAF HPNSHIGVNT PARSLLETFD ALVLTGGSED PRDLPIPGRE LRGVHFAMDF LTQQNRRGAG ISLPNQAPIS AKDKHVIVIG GGDTGSDCIG TSFRQGALAV TQLEIMPQPP EKENKLLTWP NWPYKLRTSS SQAEGASRDW AVATKTFRGE NGQVTALQLV RLKWHQNQQG HWKMEEVPNS EFELPADLVL LAMGFVHPVH AGLLEELGVA LDGRGNVEAD TERYQTSIPK VFAAGDMRRG QSLVVWAIRE GRQAAQAVDE FLMGYSDLPR
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