Gene Noc_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1587 
Symbol 
ID3705749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp1767730 
End bp1768821 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content49% 
IMG OID637738067 
Producttransposase 
Protein accessionYP_343596 
Protein GI77165071 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACGG TAGTCAAAAC ACTCAAAGTC CGCGTCAAAG ACAATAAAGC CAACGCCTTA 
AACCGCATGG CTTTTGAGGT CAATCAGGTC TGGAATAACG CCAACGAAAT AACGGCGGAG 
TACTCCAGTG TGCCTATGCC TGGGTTTGGC TATCTGCGTA GTAACTTCTC CGCCTACGAT 
CTGCACCCCT TTCAGAAAAG ATACCGAAAA GAGCGCGGAC TTAATATTAC GGCCCAAACG 
GTGCAGGAAG TGACTGAGGC CCACGCCAAA GCCCGTAGAC AGTTCAAAAA AGATAAGCTG 
CGCTGGCGTG TTTCTGGTGG TCCGCGTCGT TCTCTAGGAT GGGTGCCTTT CAAAAAGGGC 
GCGGCTAAAT GGAAAAATGG CTGCCTTTAT TTTGCTGGGC ACTATTTTAA GGTCTGGGAT 
AGCTACGGAC TATCCAAGTA CGAGTTCCGC TCCGGTTCTT TCTCTCAAGA TGCTAGGGGA 
CGCTGGTATT TCAATATTGC CGTTAGCGTC CCTGTGGAGA AAACGACGGC GACCAAAGCA 
GTAGGTATGG ACCTGGGTTT AAAGGATACC GCCACTTGTA GTAACGGTTT CAAACTGGAA 
GCGCACCGTT TCTACCGGAA TGGAGAAGCG CAACTTGGAA AAGCGCAACG CGCTAACAAG 
AAAAAACGGG TAAAGGCTAT CCATGCCAAG ATCAAAAATA GGCGTTTAGA TTCTATTCAT 
AAATTCACAA CCCAAGTGGT TCGTGAAAAC GCATTTATCG TTGTGGGTAA TCTCAGCAGT 
TCCGGCCTTG CTAAAACCAA AATGGCCAAA TCTGTTTTGG ATGCAGGCTG GTTCATGCTG 
AAAACGATGA TTGAGTACAA GTCCAAAAGG ACGCAATCGG AGTTCATAGA AGTCAACGAA 
GCGTACACTA CCCAAGCCTG TTCGTGCTGT GGTTGTATCA GCGGCAGCAG TCCGAGAGGT 
AGGGCGGGAC TTGGAATAAG AGAATGGTCA TGCTCTGAGT GTGGAGCGCA TCACGATAGA 
GACGTGAATG CAGCCATGAA CATTCTCGCG GCGGGGCATC GCCGTCTCGC AGGAGGAATC 
CCCGTCCTTT AG
 
Protein sequence
MSTVVKTLKV RVKDNKANAL NRMAFEVNQV WNNANEITAE YSSVPMPGFG YLRSNFSAYD 
LHPFQKRYRK ERGLNITAQT VQEVTEAHAK ARRQFKKDKL RWRVSGGPRR SLGWVPFKKG 
AAKWKNGCLY FAGHYFKVWD SYGLSKYEFR SGSFSQDARG RWYFNIAVSV PVEKTTATKA 
VGMDLGLKDT ATCSNGFKLE AHRFYRNGEA QLGKAQRANK KKRVKAIHAK IKNRRLDSIH 
KFTTQVVREN AFIVVGNLSS SGLAKTKMAK SVLDAGWFML KTMIEYKSKR TQSEFIEVNE 
AYTTQACSCC GCISGSSPRG RAGLGIREWS CSECGAHHDR DVNAAMNILA AGHRRLAGGI 
PVL