| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1560 |
|---|
| Symbol | |
|---|
| ID | 3705818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 1734459 |
|---|
| End bp | 1735367 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637738043 |
|---|
| Product | phytanoyl-CoA dioxygenase |
|---|
| Protein accession | YP_343572 |
|---|
| Protein GI | 77165047 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02408] ectoine hydroxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.142334 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTACA ATCAAGATTT GCTTGATTAC CATGAGGATT TGTACCCGTC CCGCATTGGT
AATACACCGC ATCTTTTTGA GCGTCGCGAT CCCGTTTTTT ATGGACAATC GCCAGGCTCA
GGCCCGCTGA ACCAAGAGCA GGTAGAATTT TATGAAAAAA AGGGATATCT TTTTTTTCAG
GATCTATTCT CCCAAAAAGA AATACAACGC TATCGCGACG AGCTGAAGGT ACTTTCCGAT
ACGGCGAGTG TCAAAAAGGC GCCGCAAACT ATCCTGGAAC CTGAACGCCA AGAGGTGCGT
TCCATCTTTG ATATCCATCG CACCAATGAG CTGTTCGACC GGCTCTCCCG AGATAAGCGC
ATTGTCAACA TTATCACTCA ATTGCTTAAT AGCCGGGTCT ATATTCATCA ATCCCGAATT
AATTACAAAC CCGGCTTCCA GGGGAAGGAA TTTTATTGGC ATTCCGACTT TGAAACCTGG
CACCAGGAAG ATGGCATGCC CCGTATGCGG GCACTTAGTT GCTCTATTAC CCTGACCGAG
AATAGTTTCT ATAATGGCCC CTTGATGCTG ATTCCTCAAT CACATTGGTA TTTCCTTTGC
TGTGTTGGAA AAACGCCCAA GGATCACTAT AAGTCTTCCC TGAGAAAACA GGAGTATGGG
GTGCCCGACA ATGAAAGTCT CCGCAGGCTT GTCGATATCG GCGGAATAGT GGCTCCCCGT
GGCCCCGCGG GCTCGGTCAT ATTTTTCGAA TGTAACCTTA TGCACGGCTC TAATTCGAAC
ATTTCTCCTT GGCCGCGGAG CAACATATTT TTTGTCTATA ACAGTATGGA AAATACTTTA
GTGCAGCCCT ATTGCGGGCT AGAACCGCGC CCGGAATATA TTGCCAACCG TGATTTTATA
CCTATTTAA
|
|---|
| Protein sequence | MAYNQDLLDY HEDLYPSRIG NTPHLFERRD PVFYGQSPGS GPLNQEQVEF YEKKGYLFFQ
DLFSQKEIQR YRDELKVLSD TASVKKAPQT ILEPERQEVR SIFDIHRTNE LFDRLSRDKR
IVNIITQLLN SRVYIHQSRI NYKPGFQGKE FYWHSDFETW HQEDGMPRMR ALSCSITLTE
NSFYNGPLML IPQSHWYFLC CVGKTPKDHY KSSLRKQEYG VPDNESLRRL VDIGGIVAPR
GPAGSVIFFE CNLMHGSNSN ISPWPRSNIF FVYNSMENTL VQPYCGLEPR PEYIANRDFI
PI
|
|---|
| |