Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1430 |
Symbol | |
ID | 3706038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 1584933 |
End bp | 1587149 |
Gene Length | 2217 bp |
Protein Length | 738 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637737920 |
Product | TonB-dependent receptor |
Protein accession | YP_343449 |
Protein GI | 77164924 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGGCGGA TTCAAGGTTG GTGTAGTGGG GGGTGTTTTC TTGGTTTGGC GATTATCTCA CAGCCTGTTT TCCCCCAGCA AGTTGATTTA GAGCAAGCTG GAGCGGACGA ATCCCCTACT GCCCGGTTAG AAGAAGTAGT GGTGACGGCA ACCCGCAGTG CGGAGTCCAT CGCGGCGATT CCCGGCGCGG TAAGGGTGAT AACCCGTCAA CAGATCGAAC AGCAGATGAA TTTATCCCGA GATCTTGGCG ATATGTTGGG TAAATTGATT CCTGGTATGG GTGTTTCTAG CCAGACGGGA AGTAATGAAG CACAGACATT ACGAGGACGT AAAGTTCTTG TGCTAATTGA TGGCGTGCCT CAGAATACTA CCCGGGATGT ATCCCGTAAC CTTTCCACCA TCCATCCTTC AGCTATTGAA CGTATTGAAG TCGTTCCCGG CGCTACGGCT ATTTATGGCC AGAGCGCGGC TGGCGGCGTT ATTAATATCC TTACTAAGGT GCCTGGTAAG GGTCCTATGG AATTGACGAC CGACACCAAT TTTAACTTTT CCTTGAGTCA TCCTGGCAGT AGTTATGGTG GCTTTGTTAA TCAAGGGATT TCTGGTCAGA AGGGTGCCTT CGATTATTTA CTCAATGGCA CTTTTGAGCA CGTCGGTGGT TTTTTTGACG CCGAGGGTGA CCGAATTCCT CCTGATCCCC ATGGGCAACA GTCACTAGAT GATTCTAATA ATTATAATAT TTTCGGAAAA TTTGGTTTCA ATTTCTATCA GCAACGCTTG CAATTTGAAA TTAATCACTT TAAAGAATCC CAGGATACTG ATTTTATCTC AGATCCTGCG GTGAAGGCTT TTCCCCCGGG GACTAAGAAG GCTCGCGCTT TAAAAGGCTT GGTTTTAGAT GATCAGCGGG GGACGGAGAA TACGCTGCTT AGTTTAGATT ATCACCATGC CGATTTATTT GGAAATCGCG TTCATGCTCA GTTTTACCAC CAGGATTTCT TGACCCGTTT TGGTCCTTTT GGTCCCTTTG CAAGTATTGG CAACCAGATA GGGCAATCTC GGTTAGAGTC TGAAAGATTT GGCGCGCGCC TGGAAATTGA GACTTTTTTG CCTAAGCTGG CTTTTGTCAC ACCTACCCTG TTGTGGGGCG CAGATTATTT CGATGAAGAA ACTTCCCAGC CTCTTGCTAT CTTCGATCAG GAGACTGTTC AAGAAAGCAA TGGGTTGGTT TTTGAAAAAA TTGATGAGCA ACTCTGGGTG CCTGCTCTTA AACCCCGTAA TTTAGGTCTT TTTGCTCAAT TGGAAGCAGA TGTTACAGAA CGTTTAATCC TGCGAGGGGG CGTGCGTTAT CAACGAATTT GGTTCGAGGT TCCCACTTTT ACTGTCCTTG CTGATGGTAG ATCAATCCAA GGAGATACCC TAAATTTTGA TGAAACCCTC TTTAATGCGG GGGCGGTATT TTATCTCACC AATGCGCTCA ATGTGTTTGC AAATTTTTCC CAAGGATTCT CCACAGCGGA TATTGGTCTA TTTTTACGTT TTCCGCCCCA GGAATTCACG ACCTTAGAAG ATCAACGCCT GGAAGCCCAA AAGGTGGATA ACTATGAAGT TGGCCTGCGG GGGGATTGGC GCACTTTGCA GTTCAGTCTC ACCGGTTTTT ATAACGAGTC CGATTTGGGA ACCCGTTCTG CGGGGTTTGG TTTGCCGGTA GTTCGGGCGC CAGAGCGCAT TTACGGCTTT GATGCCACTG TGGATATCCA ACCCATGGAT CGGCTGCGGT TAGGGGCGGC TGCCAGCTGG GTTGAAGGGG AGAGTAGGCA AGATACTGAT GGTGACGGGG TAGGCGATGG CGCTTACCAG GCTCTTAACG GCTTCCGGAT TCCGCCGGTG AAAATTTTTG GCTATATCGA GTTTGATACG GTGCCAAGAT GGCAGTGGCG GAACCGGGTT CAGGTACTAT ACTCTGGTGA CCGGGAGCGG GCATTTGAAG ATTTGGGCCC TATGGCGTTT GGCGGCAGGA AAGTAGAATC TTTTACCACG GTAGATTTGA TCAGCACCCT GCAATTGGGA CCAGGCACTT TAAAATTGGG GGTCGAGAAT TTATTGAACA ACCAATACTT CACACCGGTT TCCCAAATGC TACGAAACCG CAATAATACG AGCTATGCTG CTGCCCGGGG TGCTGTTTTT AACATTGGTT ATTCCGTGGC TTACTAA
|
Protein sequence | MWRIQGWCSG GCFLGLAIIS QPVFPQQVDL EQAGADESPT ARLEEVVVTA TRSAESIAAI PGAVRVITRQ QIEQQMNLSR DLGDMLGKLI PGMGVSSQTG SNEAQTLRGR KVLVLIDGVP QNTTRDVSRN LSTIHPSAIE RIEVVPGATA IYGQSAAGGV INILTKVPGK GPMELTTDTN FNFSLSHPGS SYGGFVNQGI SGQKGAFDYL LNGTFEHVGG FFDAEGDRIP PDPHGQQSLD DSNNYNIFGK FGFNFYQQRL QFEINHFKES QDTDFISDPA VKAFPPGTKK ARALKGLVLD DQRGTENTLL SLDYHHADLF GNRVHAQFYH QDFLTRFGPF GPFASIGNQI GQSRLESERF GARLEIETFL PKLAFVTPTL LWGADYFDEE TSQPLAIFDQ ETVQESNGLV FEKIDEQLWV PALKPRNLGL FAQLEADVTE RLILRGGVRY QRIWFEVPTF TVLADGRSIQ GDTLNFDETL FNAGAVFYLT NALNVFANFS QGFSTADIGL FLRFPPQEFT TLEDQRLEAQ KVDNYEVGLR GDWRTLQFSL TGFYNESDLG TRSAGFGLPV VRAPERIYGF DATVDIQPMD RLRLGAAASW VEGESRQDTD GDGVGDGAYQ ALNGFRIPPV KIFGYIEFDT VPRWQWRNRV QVLYSGDRER AFEDLGPMAF GGRKVESFTT VDLISTLQLG PGTLKLGVEN LLNNQYFTPV SQMLRNRNNT SYAAARGAVF NIGYSVAY
|
| |