Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1370 |
Symbol | |
ID | 3706095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1518294 |
End bp | 1518908 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637737865 |
Product | LmbE-like protein |
Protein accession | YP_343394 |
Protein GI | 77164869 |
COG category | [S] Function unknown |
COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.525647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATCG GAATGGGAGG TACTGCGGCC AAGAAAGCGG CCTCAGGTTC CCATATTACC TCGGTCATTT TAACTGATGG GAGGAGGAGC CCCAATCCCT TTGGCTGGCC GGAAGAAACC CTGGTGGAAA TTCGTAAGCA GGAGGCCACT CGAGCAGCGA GAGTGCTAGG AATCAAAGAA GTTATTTTCT TTGCTCTCCC TGATCTAAAA AATACTTCCC ATTACCATTC AGCAAAGGAG CGGCTTAGCG AGCTCATCAA GCAACTTCGC CCTGAAGAGG TCTATTCCCT CCACGATCAC TGGGACCGGC ATCCTACCCA CCGGCTAGCG GGGCAACTAA CCCGAAAATG TATCGAAGAA ACACCCCTAT TCATAGACGC CCTATGGGCT TACGAGGTTT GGGGATTATT TTCCCGCTGG GATCGCCTGG AATATATCGA TGATCAGATA GGGAAAAAAA TGCAGGCGAT AGGAGAACAT AAAAGCCAGC TCGCCTCCAT TCCTTATGGG GAAGGTATTT TGGGCCTCAA CCGGTGGCGG GCGGTCTTTG CCGATCCGCA ACAAACCACC CCTCAAGGAG TCTTTGCGGA AGTTTTTTTT ACCATGAAGC TATAG
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Protein sequence | MEIGMGGTAA KKAASGSHIT SVILTDGRRS PNPFGWPEET LVEIRKQEAT RAARVLGIKE VIFFALPDLK NTSHYHSAKE RLSELIKQLR PEEVYSLHDH WDRHPTHRLA GQLTRKCIEE TPLFIDALWA YEVWGLFSRW DRLEYIDDQI GKKMQAIGEH KSQLASIPYG EGILGLNRWR AVFADPQQTT PQGVFAEVFF TMKL
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