Gene Noc_1261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1261 
Symbol 
ID3706373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1390240 
End bp1390992 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content49% 
IMG OID637737763 
Producthypothetical protein 
Protein accessionYP_343292 
Protein GI77164767 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGCTG GACAAAGGTG GGATCCGGAA GGCTACAGCC GAAATGCGAG CTTTGTATCG 
GATCTGGGAA TGCCAGTGCT AGGGTGGCTA AATCCAAAGG CGAACGAGCA TATCCTTGAT
TTAGGCTGTG GCGATGGAGC ACTGATGGCA AGGTTAACGG CACTAGGGTG TTTCATGGTA
GGGGTAGACA GTAGCCCGGA GTTTGTCAAT AGGGTAAAAG CCCAAGCCCT AGAGGCTCAT
GTGATGGATG GTGAGCGGCT TCAATTTAAC CAGGAATTTG ATGCCGTTTT TAGTAATGCC
GCGCTGCATT GGATGAAACA GCCTGCTGCA GTAATAAGAG GAGTTTGGAA AGCGCTGGTC
CCAGGTGGGA GATTCGTTGG AGAGATGGGA GGGCAAGGGA ATATACAGGC TATTGTAACC
GCTTTGTATC AAGTATTGAA ACAGCGGGGA ATCAATCCTT ATTATCTGGA TCCATGGTAT
TTTCCTGCTG CTGAAGAATA TCAACACCAG CTCCAATCCA TTGGTTTTCA GGTGAAGCGG
ATCGTTTTAT TTGAACGTCC CACTCCGCTA CCTACGGATA TGAGAGGGTG GCTTATGACC
TTTGGCGCGT CTTTTACAGC AAGTCTGCCC AAAGCTGAAC AACCCGCGTT CATTAATGAA
GTGTGCGCTG CGCTACAGGC TAAATTGTAT CATGGTAACG GTCAATGGAT AGCCGACTAT
ATGCGCCTCC GTTTCGAAGC CTATAAACCT TAA
 
Protein sequence
MGAGQRWDPE GYSRNASFVS DLGMPVLGWL NPKANEHILD LGCGDGALMA RLTALGCFMV 
GVDSSPEFVN RVKAQALEAH VMDGERLQFN QEFDAVFSNA ALHWMKQPAA VIRGVWKALV
PGGRFVGEMG GQGNIQAIVT ALYQVLKQRG INPYYLDPWY FPAAEEYQHQ LQSIGFQVKR
IVLFERPTPL PTDMRGWLMT FGASFTASLP KAEQPAFINE VCAALQAKLY HGNGQWIADY
MRLRFEAYKP