Gene Noc_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1179 
Symbol 
ID3706753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1288167 
End bp1288502 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content46% 
IMG OID637737682 
Productpreprotein translocase subunit, YajC 
Protein accessionYP_343211 
Protein GI77164686 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATTTTT TTATTGCTGA TGCCTGGGCC CAGGGTGGCC CACCGCCAGG AGCGCCTGGA 
GATTTCTGGG TACCCTTGCT CATATTTTCC ACCATTTTCC TCGTTTATTA TTTACTTGCA
ATACGGCCAC GGTTAAAGCG TCATAAAGAG CGCCTTCGTA TGCTGGCATC CGTGAATAAA
GGCGATGAGA TCATCACTAA CGGAGGCTTA TTAGGACGGA TTCTCCAAGT AGGTGATAAT
TTTCTACTGT TAGAATTATC GGAAGGAATG GAAGTTAAAG TTGAAAAAAG CGCGGTATCT
AGAGTGGTCC CCAAGGGGAC GGCAAAGAGT TTATAG
 
Protein sequence
MNFFIADAWA QGGPPPGAPG DFWVPLLIFS TIFLVYYLLA IRPRLKRHKE RLRMLASVNK 
GDEIITNGGL LGRILQVGDN FLLLELSEGM EVKVEKSAVS RVVPKGTAKS L