Gene Noc_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1090 
Symbol 
ID3707079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1195286 
End bp1195708 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content43% 
IMG OID637737592 
Productchain A, red copper protein nitrosocyanin 
Protein accessionYP_343125 
Protein GI77164600 
COG category 
COG ID 
TIGRFAM ID[TIGR03096] nitrosocyanin 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.61148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA CTAAAGCTAT ATTTATAAGT TTTGCTCTTG GGCTGTTACT GATGGGCACA 
GCGCAAGCAA AGGATGTGAA AGCACAAAGT TTTACAGTTG TTATCAATGC TTATGATACG
AATATTCCGA AGCTTGAGGT GGAAGGAGTA ACCGTTAAGG ATATTCGCGC CTTTAATGTG
CTTAATGAGC CCGAGGCGCT GGTTGTTCGG AAAGGAACTC CAGTAGAGAT TACCGTAGAA
AATAAGTCCC CCATTAGTGA GGGGTTCTCC ATCGACGCTT ATGGCATCTC GGAAGTCATT
AAAGCAGGAG AGACCAAAAC CATTAAATTC AAGGCTGACA AGGCCGGCGC TTTCACTATT
TGGTGCCAGC TCCATCCCAT GAATATCCAT CTGCCTGGTT CCTTGAATGT CGTCGAAAAA
TAA
 
Protein sequence
MKITKAIFIS FALGLLLMGT AQAKDVKAQS FTVVINAYDT NIPKLEVEGV TVKDIRAFNV 
LNEPEALVVR KGTPVEITVE NKSPISEGFS IDAYGISEVI KAGETKTIKF KADKAGAFTI
WCQLHPMNIH LPGSLNVVEK