| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1003 |
|---|
| Symbol | |
|---|
| ID | 3707395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 1109592 |
|---|
| End bp | 1110710 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637737508 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_343041 |
|---|
| Protein GI | 77164516 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCATA CTATTCATCT TGCTGCGGGG ACTTTGACCA TTGAAGTCCA CCAAGCCCTT
CTTCCGCTGC ATGATTTATT AGATTTTGCT AGCCGAATTA ACCCCAAGCG CGGATATTTG
TTTGTTTCCA AGGTGCTTGG CAAGCATATT CCCTGCCAGC CTTCGAGAAT GCGGGATATT
TACAATCGCT TAGCCCTGTC TCTTTTAGAG ATACCCGGCC CCGCTATTTT TATCGGTATG
GCTGAAACGG CTACGGGCTT GGGCGCTGGG GTTGCAGATA GTTTAGTTCG AAGAACACAG
CGCTGTGATA TTGTTTTCCA ACACACAACC CGCCATAGCC TGCCGGTCAG CGAATGGATG
CGTTTTGATG AAGCGCACAG CCATGCGCCT GAGCATATCC TCTATCTGCC TTTGCCGGTT
TTTCGTGAAC GATTCTCCCA AGCACAAACC TTGGTTCTTG TGGATGATGA AATCAGCACA
GGGCGGACGC TGAGAGAGCT AAGCTACAGA GTGATACAAG CGTTACCCCA TATTCGGCAA
ATTATGCTGG TGTCAATTGT CAATTGGCTT TCGCCCGCTC AAAAGCAGGT ATTTCAAGAA
AATGTTAACC GGCCGGTGTC TTTTGTTAGT TTGTTAGAAG GCGTGTTTTC GTTTATTCCT
AATTTGGAAT TTAGCCCTTC CTTGCCAGGA AAAGCTAGGC TATTTCAGCC GGCGCGGCAT
GCTTGCCAGC AGACCGGCCG GCGGGGAATA GAGATAGGAG AAAAGTTCCA GGTGTCGAAC
GGTCCTTATC CAAAGGAGCG TAAGGTGTCT GTGGTGGGGA CCGGTGAGTT TCAATTTCAA
CCTTTTTTAT GGGCGGAGCA GCTGGAAAGA AAAGGCTTTG ATGTTCTGTT TCAGAGCACT
ACCCGTTCCC CTATTCGGGT GGGCGGACCC ATTGGCGAAA GTCTTAGCTT CAAAGATGAA
TATGGGGGAG GCATCCATAC CTATCTTCAT AATCCTCCTC GCGGCAGGGA AGTTATTATT
GCCTACGAAT TTGCCGAATT AGCACGTAAT CACAATCTTC CGGAGCAGCT TGGTGGAAGT
ATTTGGGGAG CGGCTGCCAA TACGGGATGG GATGGCTGA
|
|---|
| Protein sequence | MSHTIHLAAG TLTIEVHQAL LPLHDLLDFA SRINPKRGYL FVSKVLGKHI PCQPSRMRDI
YNRLALSLLE IPGPAIFIGM AETATGLGAG VADSLVRRTQ RCDIVFQHTT RHSLPVSEWM
RFDEAHSHAP EHILYLPLPV FRERFSQAQT LVLVDDEIST GRTLRELSYR VIQALPHIRQ
IMLVSIVNWL SPAQKQVFQE NVNRPVSFVS LLEGVFSFIP NLEFSPSLPG KARLFQPARH
ACQQTGRRGI EIGEKFQVSN GPYPKERKVS VVGTGEFQFQ PFLWAEQLER KGFDVLFQST
TRSPIRVGGP IGESLSFKDE YGGGIHTYLH NPPRGREVII AYEFAELARN HNLPEQLGGS
IWGAAANTGW DG
|
|---|
| |