| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0947 |
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| Symbol | |
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| ID | 3707338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1044919 |
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| End bp | 1045623 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637737455 |
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| Product | cytochrome c-type biogenesis protein CcmB |
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| Protein accession | YP_342988 |
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| Protein GI | 77164463 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCAGTT TAGCCCTACC GATGAATGCA TCTACCCTCT CTCATGCCTG CTGGTGGCTC
ACCAAACGTG ATCTCTTATT AGTGCTCAGA CACCGCAGCG ATGCCGCCAA TCCACTCCTC
TTTTTTCTCA TGGTAGCCAG CATTTTCCCG CTCGGTATCG GACCGGAGAG TGGAGTACTA
CGACAAATTG CACCCGGTAT CATCTGGATT GCAGCCTTGC TTGCCACCTT GCTTTCTTTG
GAAGCCATGT TCCGTTCAGA TTTTGATGAC GGCAGCCTGG AGCAACTTAT TCTAAGTCCC
CATCCCTTGC CTATACTGGT ACTTGCCAAA ATCTTTGCGC ACTGGCTGGC TACCGGGCTG
CCATTGATTT TGCTCGCCCC CCTTTTGGGG TTAATATTTG GCATTTCGGG TTGGCCTCTG
GTTATCTTGT TGATAACTCT CCTAGTGGGT ACGCCTGCCC TCAGTTTAGT GGGAGCAGTG
GGGGTGGCCT TAACCGTAGG GTTAAGGCGG GGTGGCTTAC TGCTTACCCT ACTATTACTC
CCCCTTTATG TCCCTATCTT GATCTTCAGC GCTGGCGCTG TAGAGACAGC CGCCCAGGGC
CTGCCTGCCG ATGGGCAGCT TTATCTCCTT GGCGCCTTAT TAGTATTGGC CGCAACCTTG
GCGCCCATCG CCACCTCGGC CGCCTTATGT ATCCGAATGA GTTAA
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| Protein sequence | MTSLALPMNA STLSHACWWL TKRDLLLVLR HRSDAANPLL FFLMVASIFP LGIGPESGVL
RQIAPGIIWI AALLATLLSL EAMFRSDFDD GSLEQLILSP HPLPILVLAK IFAHWLATGL
PLILLAPLLG LIFGISGWPL VILLITLLVG TPALSLVGAV GVALTVGLRR GGLLLTLLLL
PLYVPILIFS AGAVETAAQG LPADGQLYLL GALLVLAATL APIATSAALC IRMS
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