Gene Noc_0746 details

Gene Information

• Locus tag: Noc_0746
• ID: 3707012
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: +
• Start bp: 809565
• End bp: 811610
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637737248
• Product: Integrins alpha chain
• Protein accession: YP_342789
• Protein GI: 77164264

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTATTAA CGCTTATCGT ATTTTTTTTC TTTAGCTTAG TGGTTCTTGC TAACTCATTG 
GATGAATCGG TTGCGGAAAA ATCCTTTGCG ATTAAGTCTT ATCAAGAGAT CAAACTCGCT 
TCCCCCCACG ATGTCTTTGA TATGGGTGTG GCCGATATCA ATGGTGATGA TATCCTGGAT 
ATTTATACAA CCGGCCATTA TACTCGCGAG AATTTGCTTT TGGGGGATGG CAAGGGAAAT 
TATACGGATG CCCTGACTCG CTTGGGTTTG GATCAGGCAA GAGCGTTTCC CTATTTGGAA 
GACATGGACG CGGACCCGGT GCTAGAGGAA CCCGGCCTTT ACATTCATCG GCGACGCCGG 
TTATTAATCT TTAGAGCCCA TGGGCTGAGC GAGGAGGGAA CGATTTCCGG CCGCATTTTA 
GTGCCTTCTC CCGCCGATAG GCCCTTGCCG ATTCAGACTT ACTGGGCAGA GCACGCCAGC 
GCGGATATCA TTAATTTGGC TTCGGAATCC GGTGAGACTT GGACCAAAGT CCAATTTTCC 
ATCGCACCCC AAGGTACGTT GGTGCTTGAT ACCCTCTATA TTGCCTTGCC TTTCGAGGTG 
ACGCTGGATT CATCTCTACC CTTAAACAAG GTGAAGGTGG GGCAGCATTC TCTTCCTCCC 
AAGGAACATC ATTTTGTCCT AAGATGGCGT GATCGTCATG GCGTGGCCTG GACGGAATTG 
AATGGTGACG AATGGTTGGA TGTCTTTATG TCGACCGGCG GTTTGCGGGC AGCCCTTCAT 
CGCTTCCAAC AGTCGCAAAT TGCTTCCGAT GAACTCTTGC TCAGCGACGG AGGCAGCCGC 
TACCGGGACG TCGCCATTGA ACGGGGAATT CAGAAAAGAG ACTGCCGGAC CTATAAACCC 
GCCTGGGTGG ATATTAACCG AGATAACCGC CTGGACCTGT ATGTAGGTTG CCTGGGTGGT 
CCCAATCAGC TTTATTTGCA GGATTCAACG GGACAGTTCA GAGAGGTTGC TAAAAAGTAC 
GGCTTAGCGA CGAGGCCAGG GGCTCAATTC GTCTGGCTTG ACGTGGATCA GGACGGCGAT 
AGTGATTTAT TGGCCGATCT CAATGGTGAC GGCAACCATC TAAACCCTAA CTTTAGTCTG 
TTCACCGACA CCGATAGCCG GGTTGCATTA TTCATCAACG ATAAGGTGAA GTTTAAACGG 
AAGCTTATTC CCCGGCCGTT TAAAGGCAGC GTGATGCGGT TTGCCCTGGG GGATTTTGAC 
TCCGATGGGG ATCAGGATGT TTACGTCATT ACGGCCCGTA AAAAATACCG CCATGAGAGT 
TTCTTGCTGG TGAATAATAA GGGAAGGCTG GAACCCAAGG ATATGCGGCA ATGGGGTCTT 
CCCAAGGGCT GTCTCTCGGC AAGCTGGGTC GATGTGGATC TGGATGGCAA GCTGGATTTT 
CACTGCTTGC CTAGGGGGAT TTTCTATCAA GCCGAAAACG GACATTTTCA AAGTGCTAAT 
GAATGGACCG GTTGGAAGGC GGCCCAGAGA GCAAGAAATG GTGTAAGCTC TTGGTACGAC 
GCCGATAATG ACGGGGCCTG GGATGTATTG ATGACCCTAG GTATTCCCCC GGCGGAAGAG 
TATTTCAAAA TCCTTCGGGA ATGGCAACGG CAGCAGGCGG AGAAACAGGG CCAAACACTT 
AAAGAATGGC GGTTGGCGCG TGAGGATGTG GCCTGGCCAT TGCGGCCCAT GTGGCATTGG 
TATCATACCC GGCTCTATCA AGGACAGCCG CCTGCAAACC ATTGGTTGCA GCTTGAATTG 
GCGGGTCCAA CCGGTAACCG GAATGCCATT GGCGCCAGAG TGGAACTCTT AACGGATGAG 
GGTGCCCAGG TTCGCGAGGT GGGTGTTTCA GAGGGCGCCC ATTTTTCCCA AGGACATTAC 
CGTCTTTATT TTGGTCTGGG AAAATCTCCA CAAGCTAAGG AGGTAACGAT ATACTGGCCT 
GATGGGAAAT TGACGACCCA CTCCGATCTT AAAGCTGATC AGCTTCTTAA AATCTCCTAT 
CCCTAA 

 

Protein sequence

MVLTLIVFFF FSLVVLANSL DESVAEKSFA IKSYQEIKLA SPHDVFDMGV ADINGDDILD 
IYTTGHYTRE NLLLGDGKGN YTDALTRLGL DQARAFPYLE DMDADPVLEE PGLYIHRRRR 
LLIFRAHGLS EEGTISGRIL VPSPADRPLP IQTYWAEHAS ADIINLASES GETWTKVQFS 
IAPQGTLVLD TLYIALPFEV TLDSSLPLNK VKVGQHSLPP KEHHFVLRWR DRHGVAWTEL 
NGDEWLDVFM STGGLRAALH RFQQSQIASD ELLLSDGGSR YRDVAIERGI QKRDCRTYKP 
AWVDINRDNR LDLYVGCLGG PNQLYLQDST GQFREVAKKY GLATRPGAQF VWLDVDQDGD 
SDLLADLNGD GNHLNPNFSL FTDTDSRVAL FINDKVKFKR KLIPRPFKGS VMRFALGDFD 
SDGDQDVYVI TARKKYRHES FLLVNNKGRL EPKDMRQWGL PKGCLSASWV DVDLDGKLDF 
HCLPRGIFYQ AENGHFQSAN EWTGWKAAQR ARNGVSSWYD ADNDGAWDVL MTLGIPPAEE 
YFKILREWQR QQAEKQGQTL KEWRLAREDV AWPLRPMWHW YHTRLYQGQP PANHWLQLEL 
AGPTGNRNAI GARVELLTDE GAQVREVGVS EGAHFSQGHY RLYFGLGKSP QAKEVTIYWP 
DGKLTTHSDL KADQLLKISY P