Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0460 |
Symbol | |
ID | 3706631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 494039 |
End bp | 494914 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637736969 |
Product | short chain dehydrogenase |
Protein accession | YP_342513 |
Protein GI | 77163988 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATG AAAACCAGGA GCCAAAACCT CCTTTTCCAG AACAGCATCA AGAAAGACCT GGGCAAGAAT CCGAATTACA GCCCCAGCCC CGTTATTCAG CTCCCTTATA TAAAGGTGCG AATAAATTAC AAGGGCAAGT GGCCTTAATT ACAGGGGGCG ACTCAGGCAT TGGACGGGCG GTTGCCGTCC TGTTTGCCCG GGAAGGTGCA AATGTCACCA TCATCCATCT TGCCGAAGAA AATACCGATG CCCAAGAAAC CCGGCAGGCA GTTGAAGCCG AAGGACAGAA AGCATTATTG GTCTGTGGTG ATGTGAGTGA CAGCGCCTTC TGCCGAAGCG CCGTGGAGCA AACTATCCAG GAATTCGGCC AGCTAAATAT TTTAGTGAAT AATGCCGCCT ATCAGCAGCA CCGGAAGGAA CTAGACGAAC TTACGGAAGA GCAATGGGAT CACACCTTCA AAACCAATAT CTATGGCTAT TTTTATATGG TAAAAGCGGC GGTACCCCAC TTAAAATCGG GAAGCGCGAT TATTAATACG GGGTCAATTA CTGGCCTTGA GGGCAACGGC GCGCTGCTGG ATTATTCTTC TACCAAAGGC GCTATCCATG CATTCACCAA ATCCCTCGCC CAAAAGCTAG TAGAGGCCAG GATTCGTGTC AACTGCGTAT CTCCAGGTCC GGTCTGGACA CCACTCAACC CAGCAGATAG GCCCGCCGAG GAAGTCAGCC AATTTGGCGC TCAAACTCCC TATCAGCGAC CCGCTCAACC CGAGGAAATC GCCCCTGCTT ATGTTTATTT TGCGTCAACA GCGGATTCCA GTTATGTCAC TGGCGAGGTA TTAACCCTGC TAGGCGGTAG TACGCGGGCG GGATGA
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Protein sequence | MTNENQEPKP PFPEQHQERP GQESELQPQP RYSAPLYKGA NKLQGQVALI TGGDSGIGRA VAVLFAREGA NVTIIHLAEE NTDAQETRQA VEAEGQKALL VCGDVSDSAF CRSAVEQTIQ EFGQLNILVN NAAYQQHRKE LDELTEEQWD HTFKTNIYGY FYMVKAAVPH LKSGSAIINT GSITGLEGNG ALLDYSSTKG AIHAFTKSLA QKLVEARIRV NCVSPGPVWT PLNPADRPAE EVSQFGAQTP YQRPAQPEEI APAYVYFAST ADSSYVTGEV LTLLGGSTRA G
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