Gene Noc_0213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0213 
Symbol 
ID3706268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp238326 
End bp238919 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content48% 
IMG OID637736729 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_342273 
Protein GI77163748 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.898539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAATA TTCCGTGGGA TGCGCGTCTT GCGGCCTTGC TTGTCCGGCC CCTTTGTAAC 
TCCTGGGTTA CACCTAATCA TCTGACAACT TTGCGGCTAG CGACAGGGCT TGGCGCAGCG 
CTGTGTTTTG GGAGTGGTGA ATGGCTCAAT TTGGCCGCTT GGTTATGGGT TATGTCGACT 
TTTCTCGATC ATACTGATGG TGAACTGGCC CGAATGAGCG GCAAGCAGTC CCGTGCTGGC 
CATTTTTATG ATCTTATAAC GGATGCGGTT GCAACTATTG GTCTATTTAT GGGGATTGGC 
TGGGGTCTCA GCAGTTCCTT GTTGGGAGGA TGGGCATTAT TTATGGGAGC GATCGCGGGG 
ATTGCCATCG CTATTATTTT TCATTTTCGT AACGAGATTG AACAGCGTTC CGGGAAAGCA 
GCGACAAAGC AACCTGGTTT TGCAGGTTTT GAACCCGAAG ATAGCTTATA TTTATTACCG 
CTGATAACCT GGCTGGATGG TTTAGCTCTA TTGCTTTTGA TAGCGGCCTT GATAACTCCC 
ATTATTGCCA TTGTTGTTGG CTGGCAATAT CTTACGCAAC TCGATAAGGT GTAA
 
Protein sequence
MTNIPWDARL AALLVRPLCN SWVTPNHLTT LRLATGLGAA LCFGSGEWLN LAAWLWVMST 
FLDHTDGELA RMSGKQSRAG HFYDLITDAV ATIGLFMGIG WGLSSSLLGG WALFMGAIAG 
IAIAIIFHFR NEIEQRSGKA ATKQPGFAGF EPEDSLYLLP LITWLDGLAL LLLIAALITP 
IIAIVVGWQY LTQLDKV