Gene Noc_0199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0199 
Symbol 
ID3706234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp216937 
End bp217581 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content52% 
IMG OID637736716 
ProductTetR family regulatory protein 
Protein accessionYP_342260 
Protein GI77163735 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAGC GATCGGCAAG CCGTGATCAG GATACCCAAA CATCTGGCCA AGGGCGGGAA 
GCTATTCTTT CCGCGGCCAA GATCCAGTTT GCGGAGCAAG GCTATCATGG CACCACCCTT 
AGTCTAATTG CGGCCCATGC TAAGGTGTGT AAAGCTAATA TTTTTCATCA TTTTGGATCT 
AAAGAGGGGC TTTATCTGGC CGTTCTTAAG GATTACTGCG AGCAGCTAAG TCCTCTTCGT 
GGCGGCAGGT CGATTTCGGC GCCGACTTGT CGAGAGCAGC TGCGGCAGTT TGCCCAAATT 
CACCTTGAGA ATATGTTCAA CGAGCCGGGC GCCGTGCAGC TTTTCCTCCG TGAGCTACTG 
GCCCAGGACT CTCACCGAAA GGAAATGCTT GCCAAGGGTG TGTTGGAGGG TAATTTTGCC 
CGGCTAGTTC AGATGGTTCG CGAGGGGCAG GCCGCGGGGG AAATCCGCTC TACTATTGAT 
CCGGCGGTTT TAGCGGTAGC GTTATTGGGA GCAGATGTTT TTTTCTTCAT GGCGCGGGAT 
GTGTTCCAGC ATTTTCGGGA TGTTAGTTTT GCTGAGGGAG TAGAAGACTA CAGCAAGGCT 
TTGAGCGAAA TTTTGCTAAC GGGATGTTTG GTTGAACGGG ATTGA
 
Protein sequence
MIKRSASRDQ DTQTSGQGRE AILSAAKIQF AEQGYHGTTL SLIAAHAKVC KANIFHHFGS 
KEGLYLAVLK DYCEQLSPLR GGRSISAPTC REQLRQFAQI HLENMFNEPG AVQLFLRELL 
AQDSHRKEML AKGVLEGNFA RLVQMVREGQ AAGEIRSTID PAVLAVALLG ADVFFFMARD 
VFQHFRDVSF AEGVEDYSKA LSEILLTGCL VERD