Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0115 |
Symbol | |
ID | 3705875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 121067 |
End bp | 122944 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637736631 |
Product | ABC transporter, transmembrane region |
Protein accession | YP_342178 |
Protein GI | 77163653 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAGTG GCAATTTTCA CGGCCCTTAT CTTCGACTTC AAGACTTTGT GGCCTATTCG GACAGATATA TCTTGCTAAC TTCGACCACC CACAGTGTTC AAGCATTGGC GCGTTTGCTG CGTTATGCTA AAGGTTATCG TCGGCGAATT CTGGCGGCTA CTGCCTGCTC AATCATTAAC AAGCTATTCG ATATCGCCCC GGAAATATTG ATTGGGGTGG CTATCGATGT AGTCGTCAAT AAAGAAGACA GTTTTGTCGC TCGGTTGAAC TTCACTACGC CTGAAGAACA AATTCTAGTA TTGGCAATAC TCACCTTTTT TATTTGGGTA GGAGAGTCGC TGTTTGAATA CCTCTACAAG ATTCTGTGGC GCAACCTAGC TCAGCGGTTG CAGGCGGATC TGCGCCAGGA CACTTATGAA CATGTCCAAC AGCTGGATAT GAGTTTTTTC GAGTCGAAGA GTTCCGGCCA CCTGGTGGCA ATCATGAACG ATGACGTCAA CCAGCTTGAG CGCTTTCTGG ATGGAGGCGC TAATGCCCTA ATCCAGGTAG GGGTAGCAGT GATAGCGGTA GGTGCAGTGT TCTTCATCTT ATCACCGCTG ATCGCACTGC TCGCTTTCAC CCCGGTTCCG CTGATTATTT GGGGCGCTTT CTTCTTTCAG CGCAAGGCCG GTCCCCTCTA CAATGATGTG CGCGAGAAGG TTGGCGACTT AGCAAGCCGC CTGGGCAACA ATTTGAGTGG CATTGCCACT ATCAAGAGTT TTACCGCCGA GGCACGTGAG GCCGAGCGCC TGAAAGCAGT CAGTGAAACC TATGTAGAAG CCAATCGCAG GGCGATTCGG GTGAGTTCAG CATTTATCCC GGTAATTCGC ATGGCTATTC TGGTTGGCTT TCTGGCCACC TTCACTATCG GCGGTATGAT GGCGTTGCAG GGCAGTCTTA ATGTAGGTGC CTATGGCGTC CTAGTGTTTC TAACGCAACG TCTGCTGTGG CCGCTAACCG GCTTGGCCGA GGTTATTGAT CTTTTCGAGC GGGCCATGGC CAGCACACGG CGCATTCTCG ATCTACTGGA AGTAACAGTA GAAGTGCAGG ATGTCAGCAA TCGCTCTCTT GCGACCCCAG TTCGCGGGGA AGTCCACTTC CAGGGCGTTA GCTTTCGTTA CGCGAGCAGC GGTGCCGGCG TGGAGAACAT CAATCTATCT GTGCCAGGGG GCAGTACCTT GGCCCTAGTG GGGGCAACGG GATCAGGCAA ATCGACCCTG ATCAAGCTAC TACTGCGTTT CTATGATCCC CATGAGGGAC AAGTATGCAT TGATGGCCAG CCGGTTAGGG AGATCAGTTT ATACTCTCTG CGCCAAGCCA TCGGCCTAGT TAGCCAAGAG GTTTATCTGT TTGAAGGCAG TATCCGCAAC AATATCGCCT ACGGACGTCC CGATGCCGAC GAGGAGTCGA TCATCAAGGC TGCTATCACT GCCGAAGCTT GGAACTTCAT CCATGCGCTG CCGCAGGGGC TAGATACCCC GGTGGGTGAG CGCGGCGTGC GCCTCTCTGG CGGTCAGCGC CAGCGCTTGT CCTTGGCCCG GGCTTTAATT AAAAATCCGC CCATCCTGGT GCTGGATGAG GCTACCAGCG CCGTCGATAA TGAAACCGAG GCAGCTATCC AGCGTTCACT TCAGCGTATT GGCCATGACC GAACGGTGAT TATGATCGCC CACCGACTAT CAACCATCGT ATACGCCGAC CGGATCGTAG TGATTCATCA AGGTCGGGTC ATCGAACATG GTACCCATGC TGAGCTGCTT GAAGCTAATG GCCGCTATGC TGCCCAGTGG CGTGTACAAA CCGGCTTAGC TAAAGCCGAA GATACGCTGC TGGGATGA
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Protein sequence | MSSGNFHGPY LRLQDFVAYS DRYILLTSTT HSVQALARLL RYAKGYRRRI LAATACSIIN KLFDIAPEIL IGVAIDVVVN KEDSFVARLN FTTPEEQILV LAILTFFIWV GESLFEYLYK ILWRNLAQRL QADLRQDTYE HVQQLDMSFF ESKSSGHLVA IMNDDVNQLE RFLDGGANAL IQVGVAVIAV GAVFFILSPL IALLAFTPVP LIIWGAFFFQ RKAGPLYNDV REKVGDLASR LGNNLSGIAT IKSFTAEARE AERLKAVSET YVEANRRAIR VSSAFIPVIR MAILVGFLAT FTIGGMMALQ GSLNVGAYGV LVFLTQRLLW PLTGLAEVID LFERAMASTR RILDLLEVTV EVQDVSNRSL ATPVRGEVHF QGVSFRYASS GAGVENINLS VPGGSTLALV GATGSGKSTL IKLLLRFYDP HEGQVCIDGQ PVREISLYSL RQAIGLVSQE VYLFEGSIRN NIAYGRPDAD EESIIKAAIT AEAWNFIHAL PQGLDTPVGE RGVRLSGGQR QRLSLARALI KNPPILVLDE ATSAVDNETE AAIQRSLQRI GHDRTVIMIA HRLSTIVYAD RIVVIHQGRV IEHGTHAELL EANGRYAAQW RVQTGLAKAE DTLLG
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