Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A0957 |
Symbol | |
ID | 3785748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | - |
Start bp | 1109884 |
End bp | 1111026 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637811040 |
Product | squalene/phytoene synthase |
Protein accession | YP_411652 |
Protein GI | 82702086 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCCTCCT GTGCCAGAGC AGATAATGTT CTGCCCTTTG CGTTAACGGT TCCGGAATTT CCATCCTTGA CTACTCCCTC CACCAGACAC GAACTGCTGC ACGACATCCT CAAGCAGGTT TCCCGTTCGT TTTATCTCAC GCTCAATGTG CTGCCTATCG GAGTGCGCGA GCAGATGGGC CTGGCGTATC TGTTTGCGCG TGCCGCCGAT ACCATTGCCG ACACGGATCT GATCGACCGG GCAGAGCGTC TGAAATACCT GAACCAGTTC CGTGAGCAAT TCATGACGGC CAGGATTGAT CGGAAAGCCG TTCAGGAGAT TCAGAGCGCG CTGGTCCCTC ATCAGAAAGA CTCGGGAGAA AGCATTCTTC TGCAGCGGCT AGAGGATTGT TTCAGGCTGT ACGAGGAGTG CTCGCCCGAT GACCGGAAGC GCATCCAGTG GGTTATAAAG GTACTCACCG AAGGGATGGA AATGGACTTG AACCGCTTCC CCGGCCAGTC AGGTAACCAA CTTGCAGCGC TATCCACTCT GGACGACCTG GACCAGTACA CTTACCATGT CGCAGGTTGT GTCGGGGATT TCTGGACCAG GATGATTTGT GCTCATCGGC CGACGATGGG ACGATGGGAT GTGGAGGAGA TGGCAGCCAT CGGGGTAAGG TTCGGGAAAG GGCTGCAACT CACCAACATT CTGAAGGATA TCGGCCGGGA CCTGCACAAT GGCCGCTGTT ATATTCCCGA ATCGCTTCTC GATGAGGCAG GCCTGAAGCC CGCGAACCTG TTGAATGACA GCAGCCTGCC AAAATTCAAA CCGGTTCTCG ACCGCCTCAT CAGGATGGCC ATCGAGCACC TGGATCAAGG CTGGATTTAT ACCATGGCGA TTCCTGTCTC GGAAATTCGT CAACGGCTGG CCTGCATCTG GCCTATCCTG CTGGCCGGGG AAACCCTACG GCGTGTCGCG GTGACGCCCG ATCTGCTCGA CCCCGCCGTG TATGTCAAAG CGCCTCGAAG CGAGGTATAC CGGATAATGA CATTGACAAC CCTGACCTGC GCCAACGGCT TTGTTGCAAC CAGTTACTGG AACCGAGTCC GGGAACAGGT TGTCTCAGCC GTAGAGCAAT CACAGCAGAG CCGGCTGGCG TAA
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Protein sequence | MPSCARADNV LPFALTVPEF PSLTTPSTRH ELLHDILKQV SRSFYLTLNV LPIGVREQMG LAYLFARAAD TIADTDLIDR AERLKYLNQF REQFMTARID RKAVQEIQSA LVPHQKDSGE SILLQRLEDC FRLYEECSPD DRKRIQWVIK VLTEGMEMDL NRFPGQSGNQ LAALSTLDDL DQYTYHVAGC VGDFWTRMIC AHRPTMGRWD VEEMAAIGVR FGKGLQLTNI LKDIGRDLHN GRCYIPESLL DEAGLKPANL LNDSSLPKFK PVLDRLIRMA IEHLDQGWIY TMAIPVSEIR QRLACIWPIL LAGETLRRVA VTPDLLDPAV YVKAPRSEVY RIMTLTTLTC ANGFVATSYW NRVREQVVSA VEQSQQSRLA
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