Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A0860 |
Symbol | sdhB |
ID | 3784430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | - |
Start bp | 979008 |
End bp | 979703 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637810942 |
Product | succinate dehydrogenase iron-sulfur subunit |
Protein accession | YP_411555 |
Protein GI | 82701989 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.620346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTCT CGATCTACCG CTTCGATCCG GACAAGGACG AAAAGCCTTA TATGCAGAAC TACGAAATCA CGCTGGAACC GGCGGACAGG ATGCTGCTGG ATGCGTTGAT ACGGATAAAA ACCGTGGACG ACAGTCTGAG TCTGCGACGT TCCTGCCGGG AAGGCGTATG CGGTTCGGAT GCGATGAACA TCAACGGCCG GAACGGCCTG GCGTGCATCA CTCCCGTGAA AGGCCTGAGG GAACCGGTGG AATTGCGCCC CCTGCCGGGA TTGCCGGTGA TACGCGATTT GATCGTCGAT ATGACCCAGT TCTTCAAACA GTATCACTCG ATCAAACCCT ACCTCATCAA TGACGACCCG CCGCCGGAAA CCGAAAGGCT CCAGTCTCCC GAGGAAAGGG CGGAACTGGA TGGGCTGTAC GAATGCATTC TGTGTGCATG CTGTTCTACC GCATGCCCCT CTTTCTGGTG GAATCCCGAT AAATACGTGG GACCGGCAGG CCTGCTGCAG GCGTACCGCT TTCTGGCAGA CAGCCGGGAC CAGGCAACCG CCGAGCGGCT GGATTATCTC GAAGACCCGT ACCGCCTTTT CCGCTGCCAC TCCATCATGA ATTGCACGGA TGTATGTCCG AAAGGCTTGA ACCCGATGGA AGCGATCAGC CGGATCAAGA CCATGATGAC CAAGAGAACC ATCTGA
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Protein sequence | MKFSIYRFDP DKDEKPYMQN YEITLEPADR MLLDALIRIK TVDDSLSLRR SCREGVCGSD AMNINGRNGL ACITPVKGLR EPVELRPLPG LPVIRDLIVD MTQFFKQYHS IKPYLINDDP PPETERLQSP EERAELDGLY ECILCACCST ACPSFWWNPD KYVGPAGLLQ AYRFLADSRD QATAERLDYL EDPYRLFRCH SIMNCTDVCP KGLNPMEAIS RIKTMMTKRT I
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