Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1734 |
Symbol | |
ID | 5773930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1590433 |
End bp | 1590930 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641317388 |
Product | hypothetical protein |
Protein accession | YP_001583068 |
Protein GI | 161529242 |
COG category | [S] Function unknown |
COG ID | [COG5615] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.506892 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCAA TAGAGCAAGC AATTCTTACT TGGATTCATC TTGTTGCAGC TGCAATTTGG GTAGGTGGAT CATTATTCAT TGGAATAGTT TTTTCTCCTC TTCTCAAAAC TATGACAAAC TCAATTGAAG AAAGAATGCA AATTATGATT CGTGTTGGAA GACGATTTAA CAAAGTAGCT GTCCCTTCAT TAATTATTTT GATGGCAACA GGATTGTATA GTTCTCATGT GTTACTAAGT AAACCAGAAC TTCTTGTTGC AACAAGTTAT GGAACTTTTC TTATAATCAA GATACTTCTT GTAATTGCAC TAATTATTAC ATACATTGTT CATGTTCGAG TAATTCGAAA AGATGTTGAA GATAAAATAA TGTCAAACCA AATGCCTGAA CCTCAAATTC AAAAATTAAG AAAAAAAATC ATTATTCTTG GAGAAATTAC TGTAGTTCTA TCTGTAGCAA TACTATTCTT TGCAGCATTA CTTGATGCTG GAGTATGA
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Protein sequence | MAAIEQAILT WIHLVAAAIW VGGSLFIGIV FSPLLKTMTN SIEERMQIMI RVGRRFNKVA VPSLIILMAT GLYSSHVLLS KPELLVATSY GTFLIIKILL VIALIITYIV HVRVIRKDVE DKIMSNQMPE PQIQKLRKKI IILGEITVVL SVAILFFAAL LDAGV
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