Gene Nmar_1734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1734 
Symbol 
ID5773930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1590433 
End bp1590930 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content32% 
IMG OID641317388 
Producthypothetical protein 
Protein accessionYP_001583068 
Protein GI161529242 
COG category[S] Function unknown 
COG ID[COG5615] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.506892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAA TAGAGCAAGC AATTCTTACT TGGATTCATC TTGTTGCAGC TGCAATTTGG 
GTAGGTGGAT CATTATTCAT TGGAATAGTT TTTTCTCCTC TTCTCAAAAC TATGACAAAC
TCAATTGAAG AAAGAATGCA AATTATGATT CGTGTTGGAA GACGATTTAA CAAAGTAGCT
GTCCCTTCAT TAATTATTTT GATGGCAACA GGATTGTATA GTTCTCATGT GTTACTAAGT
AAACCAGAAC TTCTTGTTGC AACAAGTTAT GGAACTTTTC TTATAATCAA GATACTTCTT
GTAATTGCAC TAATTATTAC ATACATTGTT CATGTTCGAG TAATTCGAAA AGATGTTGAA
GATAAAATAA TGTCAAACCA AATGCCTGAA CCTCAAATTC AAAAATTAAG AAAAAAAATC
ATTATTCTTG GAGAAATTAC TGTAGTTCTA TCTGTAGCAA TACTATTCTT TGCAGCATTA
CTTGATGCTG GAGTATGA
 
Protein sequence
MAAIEQAILT WIHLVAAAIW VGGSLFIGIV FSPLLKTMTN SIEERMQIMI RVGRRFNKVA 
VPSLIILMAT GLYSSHVLLS KPELLVATSY GTFLIIKILL VIALIITYIV HVRVIRKDVE
DKIMSNQMPE PQIQKLRKKI IILGEITVVL SVAILFFAAL LDAGV