Gene Nmar_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1662 
Symbol 
ID5773941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1520144 
End bp1521322 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content37% 
IMG OID641317316 
Productputative metal cation transporter 
Protein accessionYP_001582996 
Protein GI161529170 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0428] Predicted divalent heavy-metal cations transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTG ATGAGAAAAG ATCCCAGGCC AAAGTTATTG CTAGTGGAAT AATCCCATTT 
GCATTTATTG TTTTGATGGT GGCATACATC TTTGGACCAG GCTCGGATTT ACTTGATTTG
GGTATCCCGT TACCTGAAGT AACTATTGAA AAAGTTGATT TCCTAGAATC AGAAATACAT
GCAACCGTAA GGAATACTGG CCCTATTCCA GTTGAAGTAG TTATGGCGGA TGTTAACGAC
AGAATTCATC CTGCTGCAGT AGAGCCTGAT AGATTTCTAG AGAGATATGA AACGGCACTT
GTAAGAATTC CATTTGAATG GAATGATGCA GAACCATACA TTATCGGAAT CACAGTAGAC
GATGGAACTA GGTTTGAAAA AGAGATTGCT GCTGCTGCTC CTGCATTGCA ACCAACTTTA
GATCTTGCAG TATTTTTTGC AATAATTGGA ACTTATGTTG GAATAATTCC CGTAATGATT
GGACTTTTGT GGTTGCCTTT TATTAAAAAA ATTAAAAAGT CAAAATACCA TTTCTTTTTG
GCATTAACTG CAGGACTGTT GTTATTTTTA GGGATTGATT CTATTGAAGA AGCAATAGAA
GTCTCTGATG AAAATCTTGC ATCTAGTTTC AATGGAGTAT TACTTGTTGC CACAACTTCA
GTACTCTCAT TTCTTGGTTT GTACTATGCT GGTGAAAAAT TAATAAAAAT ATCAGATTCC
TCTAGAATTA CAAAACCGGT AGCTATTGCA TTAATGATTG CAATAGGAAT TGGATTGCAC
AACTTTGGCG AAGGGTTGGC AATAGGTGCC GCAGTAGGCT TGGGCTCTAT TGCCTTTAGT
ACATTTTTGA TAGTGGGATT TGCACTTCAT AACACCACTG AAGGAATTGC AATTGCATCT
CCAATGTCCA GAGAAAAAAC AGTAATTTGG AAACTTACAG CTATGGGAAT GATTGCAGGA
GCACCTGCAA TCTTTGGAGC ATGGGTAGGA GGCTTTGTTT ACTCTCCATT CTCATCAGTA
ATATTTCTCT CAATAGGGGC TGGCGCCATA TTTCAAGTAA TTATTACCAT TTTGAAATGG
ATTAGAACTG AAGGTGATCG TAATTTATCT AGTGCTGCAG TTGCCTCAGG ATTTGCTTTA
GGTATGTTGA TAATGTATAT GACTAGTATC TTGGTTTGA
 
Protein sequence
MELDEKRSQA KVIASGIIPF AFIVLMVAYI FGPGSDLLDL GIPLPEVTIE KVDFLESEIH 
ATVRNTGPIP VEVVMADVND RIHPAAVEPD RFLERYETAL VRIPFEWNDA EPYIIGITVD
DGTRFEKEIA AAAPALQPTL DLAVFFAIIG TYVGIIPVMI GLLWLPFIKK IKKSKYHFFL
ALTAGLLLFL GIDSIEEAIE VSDENLASSF NGVLLVATTS VLSFLGLYYA GEKLIKISDS
SRITKPVAIA LMIAIGIGLH NFGEGLAIGA AVGLGSIAFS TFLIVGFALH NTTEGIAIAS
PMSREKTVIW KLTAMGMIAG APAIFGAWVG GFVYSPFSSV IFLSIGAGAI FQVIITILKW
IRTEGDRNLS SAAVASGFAL GMLIMYMTSI LV