Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1571 |
Symbol | |
ID | 5773862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 1438772 |
End bp | 1439506 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 641317224 |
Product | hypothetical protein |
Protein accession | YP_001582905 |
Protein GI | 161529079 |
COG category | [R] General function prediction only |
COG ID | [COG1634] Uncharacterized Rossmann fold enzyme |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGATTT CAGGTTGGAA AGCAAAGTAT GCAGATATTC TAAAGGAATT CAAATATGAT GAGAAAAAAG ACAAGGAATC AGCCATATTA TTAGATACAA TTCTGAAAAA ATCAAAAACC ATCAAAAAAA TTCAGGATCT AATTCAAGGA AATACAGTAT TGGTAATAGG TTCTGGCCCT TCATTATCAC ATGCAATTCC AAAATTAAAG AAATTAAAGA GAGTAATCAT AATTGCAGCT GATAGTTCGT TAAAGCCGTT ATTGGAAAAT GGAATTGTTC CAGATATTGT TGTAACAGAT TTAGATGGAG ATGAAAAATC GTTTAAAAAA ATTGCAAAAA GATCAATCTT TGTAGTTCAT GCACATGGAG ATAATATTGA GAAATTAGAA TTTGTAAAAA AATTCAAAAA TTGTGTCGGT ACTACACAAA CTAAACCATT TAACAAAATA GAAAATTTTG GAGGATTTAC AGATGGAGAT AGAGGAGTTT TTCTAGCAAG TTATTTTGAA GCAAAAAAAA TTATTCTTTT TGGCATGGAT TTTGGTGACA GGATAGGAAA ATTTTCAAAT ACAAAAAAAT CTGAAAGGAA AATAAAATTA ATGAAGTTAA AAAAAGGAAA ATTACTCTTA GAGTGGTTAT CTACAAAGAC AAAATCAGAA CTATTTACTA CTTCAACTAG TATCAAAGGA TTTGAGAAAA TTCCATACAA AAGCCTGGAT ATTATAATTA CCTAG
|
Protein sequence | MMISGWKAKY ADILKEFKYD EKKDKESAIL LDTILKKSKT IKKIQDLIQG NTVLVIGSGP SLSHAIPKLK KLKRVIIIAA DSSLKPLLEN GIVPDIVVTD LDGDEKSFKK IAKRSIFVVH AHGDNIEKLE FVKKFKNCVG TTQTKPFNKI ENFGGFTDGD RGVFLASYFE AKKIILFGMD FGDRIGKFSN TKKSERKIKL MKLKKGKLLL EWLSTKTKSE LFTTSTSIKG FEKIPYKSLD IIIT
|
| |